RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA694557", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA694557 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32737901 32737901 PRJNA694557_P_NODE_4260_length_734_cov_2.683812_g4049_i0 PRJNA694557 4260 734 2.683812 19.69918008 Dictyostelium purpureum 5786 Evosea other_Eukaryota 162 3.5199999999999998e-43   NR XP_003294578.1 5786 g4049 i0 46.7 1.48773841961853 182 82 68.3 1 229 729 115 296 XP_003294578.1 uncharacterized protein DICPUDRAFT_159601 [Dictyostelium purpureum] diamond 1092 162 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32800543 32800543 PRJNA694557_P_NODE_24040_length_248_cov_1.457143_g23820_i0 PRJNA694557 24040 248 1.457143 3.61371464 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47 0.00129   NR KAH3745696.1 1580589 g23820 i0 40 1.02822580645161 85 44 98 4 243 1 1077 1158 KAH3745696.1 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase [Pelomyxa schiedti] diamond 255 47 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;