RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA692200" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA692200 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672934 672934 PRJNA692200_S_NODE_521_length_500_cov_731.445676_g488_i0 PRJNA692200 521 500 731.445676 3657.22838 archaeon 1906665 Archaea Archaea 124 7.12e-32   NR MCQ2818700.1 1906665 g488 i0 52.8 0.75 125 42 72 3 4 363 120 232 MCQ2818700.1 30S ribosomal protein S3 [archaeon] diamond 375 124 1 Archaea               archaeon
30019547 30019547 PRJNA692200_S_NODE_10451_length_219_cov_2.758824_g10394_i0 PRJNA692200 10451 219 2.758824 6.04182456 archaeon 1906665 Archaea Archaea 109 5.13e-26   NR MCQ2816174.1 1906665 g10394 i0 68.1 1.89041095890411 69 22 94.5 0 11 217 451 519 MCQ2816174.1 hypothetical protein [archaeon] diamond 414 109 1 Archaea               archaeon
31030686 31030686 PRJNA692200_S_NODE_19055_length_169_cov_2.750000_g18998_i0 PRJNA692200 19055 169 2.75 4.6475 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 42 0.00251   NR MCD6367831.1 3121606 g18998 i0 58.1 2.73372781065089 31 13 55 0 4 96 8 38 MCD6367831.1 DNA-directed RNA polymerase subunit P [Candidatus Aenigmatarchaeota archaeon] diamond 462 42 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;