RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA692200" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA692200 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1948522 1948522 PRJNA692200_S_NODE_10782_length_216_cov_3.832335_g10725_i0 PRJNA692200 10782 216 3.832335 8.2778436 uncultured Desulfuromonas sp. 181013 Bacteria Bacteria 89.8 1.45e-13   NTclustered gi|2621785003|emb|OY781461.1| 181013 g10725 i0 88 1.53240740740741 75 9 35 0 8 82 2634 2560 MAG: uncultured Desulfuromonas sp. isolate fc3ca4bd-ee85-4ad2-8383-0bc2b366ff34 genome assembly, chromosome: 1 blastn 331 89.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas uncultured Desulfuromonas sp.
7051411 7051411 PRJNA692200_S_NODE_2246_length_368_cov_1024.852665_g2189_i0 PRJNA692200 2246 368 1024.852665 3771.4578072 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 113 1.39e-29   NR GJM17744.1 2202153 g2189 i0 71.8 0.635869565217391 78 22 63.6 0 366 133 50 127 GJM17744.1 MAG: hypothetical protein DHS20C13_30710 [Thermodesulfobacteriota bacterium] diamond 234 113 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30599279 30599279 PRJNA692200_S_NODE_21533_length_163_cov_1.333333_g21476_i0 PRJNA692200 21533 163 1.333333 2.17333279 Candidatus Electrothrix 1859128 Bacteria Bacteria 78.6 3.57e-17   NR MCI5147488.1 2202841 g21476 i0 59.3 4.96932515337423 54 22 99.4 0 162 1 41 94 MCI5147488.1 hypothetical protein [Candidatus Electrothrix sp. AR3] diamond 810 79 0.994936708860759 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium AR3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;