RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA692200" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27051037 27051037 PRJNA692200_S_NODE_5782_length_275_cov_1.084071_g5725_i0 PRJNA692200 5782 275 1.084071 2.98119525 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 43.1 0.0379   NR MCK5016179.1 2735830 g5725 i0 47.7 0.48 44 20 48 1 71 202 277 317 MCK5016179.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 132 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
30567509 30567509 PRJNA692200_S_NODE_14213_length_192_cov_2.174825_g14156_i0 PRJNA692200 14213 192 2.174825 4.175664 Bacteria 2 Bacteria Bacteria 94 7.3e-23   NR MCA9377405.1 2030811 g14156 i0 82.3 1.9375 62 11 96.9 0 188 3 52 113 MCA9377405.1 hypothetical protein [Candidatus Peregrinibacteria bacterium] diamond 372 94 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium
31958824 31958824 PRJNA692200_S_NODE_17877_length_174_cov_1.624000_g17820_i0 PRJNA692200 17877 174 1.624 2.82576 Bacteria 2 Bacteria Bacteria 42.7 0.0063   NR MCA9377405.1 2030811 g17820 i0 47.1 1.75862068965517 51 24 87.9 2 22 174 14 61 MCA9377405.1 hypothetical protein [Candidatus Peregrinibacteria bacterium] diamond 306 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;