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contig_metadata

12 rows where bioproject = "PRJNA692200" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA692200 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672563 672563 PRJNA692200_S_NODE_1121_length_431_cov_320.225131_g1074_i0 PRJNA692200 1121 431 320.225131 1380.17031461 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 5.19e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g1074 i0 96.296 1.19257540603248 81 1 18 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5776004 5776004 PRJNA692200_S_NODE_1005_length_441_cov_322.469388_g960_i0 PRJNA692200 1005 441 322.469388 1422.09000108 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 5.32e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g960 i0 96.296 1.16553287981859 81 1 18 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7051508 7051508 PRJNA692200_S_NODE_4406_length_301_cov_1320.654762_g4349_i0 PRJNA692200 4406 301 1320.654762 3975.17083362 Betacoronavirus pandemicum 3418604 Viruses Viruses 71.3 7.73e-8   NTclustered gi|2165836883|emb|OV197187.1| 2697049 g4349 i0 87.719 12.8073089700997 57 5 18 1 1 55 103 159 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3855 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7557168 7557168 PRJNA692200_S_NODE_20366_length_166_cov_0.888889_g20309_i0 PRJNA692200 20366 166 0.888889 1.47555574 Potyvirus 12195 Viruses Viruses 305 9.67e-79   NTclustered gi|157739355|gb|EU021065.1| 12844 g20309 i0 100 99.3795180722892 165 0 99 0 2 166 1448 1284 Sweet potato feathery mottle virus isolate Fio polyprotein gene, partial cds blastn 16497 305 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus batataplumei
8325941 8325941 PRJNA692200_S_NODE_2687_length_351_cov_980.519868_g2630_i0 PRJNA692200 2687 351 980.519868 3441.62473668 Betacoronavirus pandemicum 3418604 Viruses Viruses 137 8.9e-28   NTclustered gi|2165834303|emb|OV196009.1| 2697049 g2630 i0 96.471 23.8461538461538 85 0 24 2 8 90 29995 29912 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8370 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8326111 8326111 PRJNA692200_S_NODE_8127_length_242_cov_1733.860104_g8070_i0 PRJNA692200 8127 242 1733.860104 4195.94145168 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.67e-8   NTclustered gi|2165836883|emb|OV197187.1| 2697049 g8070 i0 87.931 15.9338842975207 58 5 23 1 187 242 160 103 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3856 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9601270 9601270 PRJNA692200_S_NODE_2628_length_353_cov_984.404605_g2571_i0 PRJNA692200 2628 353 984.404605 3474.94825565 Betacoronavirus pandemicum 3418604 Viruses Viruses 137 8.959999999999999e-28   NTclustered gi|2165834303|emb|OV196009.1| 2697049 g2571 i0 96.471 23.7110481586402 85 0 24 2 8 90 29995 29912 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8370 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12151779 12151779 PRJNA692200_S_NODE_12770_length_201_cov_2.559211_g12713_i0 PRJNA692200 12770 201 2.559211 5.14401411 Mitovirus sp. 2587224 Viruses Viruses 89.8 1.33e-13   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g12713 i0 98.039 0.253731343283582 51 1 25 0 149 199 111 61 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 51 89.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
13426585 13426585 PRJNA692200_S_NODE_2731_length_349_cov_417.023333_g2674_i0 PRJNA692200 2731 349 417.023333 1455.41143217 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 4.12e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g2674 i0 96.296 1.84240687679083 81 1 23 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 643 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15975608 15975608 PRJNA692200_S_NODE_3953_length_312_cov_476.121673_g3896_i0 PRJNA692200 3953 312 476.121673 1485.49961976 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 3.64e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g3896 i0 96.296 1.6474358974359 81 1 25 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18524809 18524809 PRJNA692200_S_NODE_2815_length_346_cov_449.451178_g2758_i0 PRJNA692200 2815 346 449.451178 1555.10107588 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 4.09e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g2758 i0 96.296 1.48554913294798 81 1 23 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
19799801 19799801 PRJNA692200_S_NODE_4496_length_299_cov_7.856000_g4439_i0 PRJNA692200 4496 299 7.856 23.48944 Zebrafish picornavirus 1 2304617 Viruses Viruses 538 1.7499999999999993e-148   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g4439 i0 99.003 4.68896321070234 301 1 100 2 1 299 7932 8232 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1402 538 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;