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contig_metadata

11 rows where bioproject = "PRJNA692200", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

  • Metazoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1948919 1948919 PRJNA692200_S_NODE_6122_length_269_cov_3.431818_g6065_i0 PRJNA692200 6122 269 3.431818 9.23159042 Auanema sp. JU1783 2878363 Nematoda Nematoda 90.1 3.76e-21   NR CAI4224357.1 2878363 g6065 i0 49.4 6.68029739776952 81 39 88.1 1 33 269 1 81 CAI4224357.1 unnamed protein product [Auanema sp. JU1783] diamond 1797 90.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
9601273 9601273 PRJNA692200_S_NODE_2688_length_351_cov_183.854305_g2631_i0 PRJNA692200 2688 351 183.854305 645.32861055 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 141 5.4e-39   NR NP_507940.1 6239 g2631 i0 75.6 11.6239316239316 86 21 73.5 0 3 260 168 253 NP_507940.1 Large ribosomal subunit protein uL2 [Caenorhabditis elegans] diamond 4080 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
13933225 13933225 PRJNA692200_S_NODE_1251_length_422_cov_889.206434_g1202_i0 PRJNA692200 1251 422 889.206434 3752.45115148 Pristionchus 54125 Nematoda Nematoda 106 3.08e-18   NTclustered gi|150984424|gb|EF634854.1| 54126 g1202 i0 91.026 12.3293838862559 78 7 18 0 125 202 572 495 Pristionchus pacificus small subunit ribosomal protein 8 (rps-8) mRNA, partial cds blastn 5203 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
22856660 22856660 PRJNA692200_S_NODE_4878_length_291_cov_8.115702_g4821_i0 PRJNA692200 4878 291 8.115702 23.61669282 Metazoa 33208 Nematoda Nematoda 65.8 3.46e-6   NTclustered gi|2445368477|ref|XM_003103930.2| 31234 g4821 i0 97.368 17.3127147766323 38 1 13 0 31 68 172 209 Caenorhabditis remanei uncharacterized protein (GCK72_011523), partial mRNA blastn 5038 65.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
25405742 25405742 PRJNA692200_S_NODE_7040_length_256_cov_3.463768_g6983_i0 PRJNA692200 7040 256 3.463768 8.86724608 Metazoa 33208 Nematoda Nematoda 100 8.19e-17   NTclustered gi|270309007|dbj|AB500146.1| 6326 g6983 i0 93.939 24.4296875 66 4 26 0 1 66 1071 1136 Bursaphelenchus xylophilus Bx_act1 mRNA for actin, complete cds blastn 6254 100 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
27714810 27714810 PRJNA692200_S_NODE_264_length_567_cov_3.916988_g237_i0 PRJNA692200 264 567 3.916988 22.20932196 Meloidogyne graminicola 189291 Nematoda Nematoda 72 2.65e-11   NR AVZ46778.1 189291 g237 i0 35.2 0.677248677248677 128 83 67.7 0 152 535 117 244 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 384 72 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
28862237 28862237 PRJNA692200_S_NODE_1728_length_393_cov_19.892442_g1671_i0 PRJNA692200 1728 393 19.892442 78.17729706 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 77 3.82e-15   NR GMT18625.1 1538716 g1671 i0 43 2.2824427480916 100 53 76.3 1 386 87 31 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 897 77 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30156859 30156859 PRJNA692200_S_NODE_7652_length_248_cov_2.658291_g7595_i0 PRJNA692200 7652 248 2.658291 6.59256168 Metazoa 33208 Nematoda Nematoda 55.5 4.86e-7   NR CAD5208164.1 6326 g7595 i0 37 3.32661290322581 54 34 65.3 0 243 82 111 164 CAD5208164.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 825 55.8 0.99462365591397806 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31062298 31062298 PRJNA692200_S_NODE_22135_length_162_cov_0.893805_g22078_i0 PRJNA692200 22135 162 0.893805 1.4479641 Caenorhabditis remanei 31234 Nematoda Nematoda 41.2 0.0427   NR XP_053582142.1 31234 g22078 i0 72 0.925925925925926 25 7 46.3 0 161 87 250 274 XP_053582142.1 hypothetical protein GCK72_019793 [Caenorhabditis remanei] diamond 150 41.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
31674039 31674039 PRJNA692200_S_NODE_18117_length_173_cov_1.653226_g18060_i0 PRJNA692200 18117 173 1.653226 2.86008098 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 42 0.0131   NR TKR89361.1 34508 g18060 i0 40.7 5.67052023121387 54 32 93.6 0 163 2 62 115 TKR89361.1 hypothetical protein L596_013477 [Steinernema carpocapsae] diamond 981 42 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
32370383 32370383 PRJNA692200_S_NODE_13199_length_198_cov_3.744966_g13142_i0 PRJNA692200 13199 198 3.744966 7.41503268 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72 9.53e-13   NR ADH95415.1 51550 g13142 i0 81 3.95454545454545 42 7 63.6 1 198 73 392 432 ADH95415.1 enolase [Heterorhabditis indica] diamond 783 72.4 0.994475138121547 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heterorhabditidae Heterorhabditis Heterorhabditis indica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;