contig_metadata
28 rows where bioproject = "PRJNA692200", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 672700 | 672700 | PRJNA692200_S_NODE_17221_length_177_cov_1.664062_g17164_i0 | PRJNA692200 | 17221 | 177 | 1.664062 | 2.94538974 | Parvimonas micra | 33033 | Bacteria | Bacteria | 294 | 2.25e-75 | NTclustered | gi|2418006839|gb|CP101410.1| | 33033 | g17164 | i0 | 96.61 | 248.779661016949 | 177 | 6 | 100 | 0 | 1 | 177 | 312967 | 312791 | Parvimonas micra strain PM89KC-G-2 chromosome, complete genome | blastn | 44034 | 294 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 672816 | 672816 | PRJNA692200_S_NODE_22861_length_158_cov_2.348624_g22804_i0 | PRJNA692200 | 22861 | 158 | 2.348624 | 3.71082592 | Bacillus cereus | 1396 | Bacteria | Bacteria | 65.8 | 1.68e-6 | NTclustered | gi|1219791826|gb|CP022446.1| | 1003239 | g22804 | i0 | 75.325 | 12.9177215189873 | 154 | 29 | 96 | 6 | 4 | 155 | 652642 | 652788 | Bacillus cereus C1L plasmid pC1L1, complete sequence | blastn | 2041 | 65.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 1179274 | 1179274 | PRJNA692200_S_NODE_4361_length_303_cov_2.062992_g4304_i0 | PRJNA692200 | 4361 | 303 | 2.062992 | 6.25086576 | Bacillota | 1239 | Bacteria | Bacteria | 276 | 1.5399999999999999e-69 | NTclustered | gi|1840485543|gb|CP053187.1| | 154288 | g4304 | i0 | 89.545 | 417.03300330033 | 220 | 20 | 73 | 3 | 76 | 294 | 681471 | 681688 | Turicibacter sanguinis strain MOL361 chromosome, complete genome | blastn | 126361 | 278 | 0.992805755395683 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Turicibacteraceae | Turicibacter | Turicibacter sanguinis | ||
| 2454545 | 2454545 | PRJNA692200_S_NODE_20582_length_165_cov_2.715517_g20525_i0 | PRJNA692200 | 20582 | 165 | 2.715517 | 4.48060305 | root | 1 | Root_unresolved | Root_unresolved | 56.5 | 0.001 | NTclustered | gi|2230200769|gb|CP073714.1| | 1472 | g20525 | i0 | 100 | 4.50909090909091 | 30 | 0 | 18 | 0 | 74 | 103 | 1090459 | 1090430 | Paenibacillus pabuli strain E1 chromosome, complete genome | blastn | 744 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus pabuli | ||
| 3731070 | 3731070 | PRJNA692200_S_NODE_14283_length_191_cov_18.823944_g14226_i0 | PRJNA692200 | 14283 | 191 | 18.823944 | 35.95373304 | Peptostreptococcaceae | 186804 | Bacteria | Bacteria | 348 | 1.87e-91 | NTclustered | gi|2695214537|gb|CP124295.1| | 1505 | g14226 | i0 | 99.476 | 919.79057591623 | 191 | 1 | 100 | 0 | 1 | 191 | 49199 | 49389 | Paraclostridium sordellii strain C116 chromosome, complete genome | blastn | 175680 | 348 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Paraclostridium | Paraclostridium sordellii | ||
| 7051329 | 7051329 | PRJNA692200_S_NODE_18646_length_171_cov_1.278689_g18589_i0 | PRJNA692200 | 18646 | 171 | 1.278689 | 2.18655819 | Paraclostridium bifermentans | 1490 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2501758084|gb|CP124685.1| | 1490 | g18589 | i0 | 100 | 0.16374269005848 | 28 | 0 | 16 | 0 | 50 | 77 | 2303745 | 2303718 | Paraclostridium bifermentans strain SampleS7P1 isolate gram staining chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Paraclostridium | Paraclostridium bifermentans | ||
| 7051590 | 7051590 | PRJNA692200_S_NODE_7226_length_254_cov_1.595122_g7169_i0 | PRJNA692200 | 7226 | 254 | 1.595122 | 4.05160988 | Streptococcus ferus | 1345 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1403304616|emb|LS483343.1| | 1345 | g7169 | i0 | 100 | 0.114173228346457 | 29 | 0 | 11 | 0 | 20 | 48 | 95780 | 95808 | Streptococcus ferus strain NCTC12278 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus ferus | ||
| 8832235 | 8832235 | PRJNA692200_S_NODE_6387_length_265_cov_1632.189815_g6330_i0 | PRJNA692200 | 6387 | 265 | 1632.189815 | 4325.30300975 | Staphylococcus | 1279 | Bacteria | Bacteria | 401 | 2.0899999999999994e-107 | NTclustered | gi|2814765382|gb|CP170661.1| | 1282 | g6330 | i0 | 98.253 | 458.064150943396 | 229 | 4 | 86 | 0 | 37 | 265 | 793298 | 793070 | Staphylococcus epidermidis strain CCARM 3A686 chromosome, complete genome | blastn | 121387 | 401 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 9601093 | 9601093 | PRJNA692200_S_NODE_15708_length_184_cov_3.696296_g15651_i0 | PRJNA692200 | 15708 | 184 | 3.696296 | 6.80118464 | root | 1 | Root_unresolved | Root_unresolved | 80.1 | 3.72e-18 | NR | MDK0835637.1 | 1502 | g15651 | i0 | 71.4 | 27.3260869565217 | 49 | 14 | 79.9 | 0 | 3 | 149 | 18 | 66 | MDK0835637.1 peptidylprolyl isomerase [Clostridium perfringens] | diamond | 5028 | 80.9 | 0.990111248454882 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 10107924 | 10107924 | PRJNA692200_S_NODE_17788_length_174_cov_2.992000_g17731_i0 | PRJNA692200 | 17788 | 174 | 2.992 | 5.20608 | Streptococcus | 1301 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|2072520965|gb|CP079821.1| | 1234680 | g17731 | i0 | 100 | 341.505747126437 | 174 | 0 | 100 | 0 | 1 | 174 | 334145 | 333972 | Streptococcus rubneri strain LPB0404 chromosome, complete genome | blastn | 59422 | 322 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus rubneri | ||
| 10877034 | 10877034 | PRJNA692200_S_NODE_7289_length_253_cov_1.607843_g7232_i0 | PRJNA692200 | 7289 | 253 | 1.607843 | 4.06784279 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 416 | 7.069999999999999e-112 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g7232 | i0 | 97.154 | 56.6442687747036 | 246 | 7 | 97 | 0 | 8 | 253 | 121307 | 121062 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 14331 | 416 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 12152105 | 12152105 | PRJNA692200_S_NODE_530_length_499_cov_145.008889_g497_i0 | PRJNA692200 | 530 | 499 | 145.008889 | 723.59435611 | Brevibacillus fulvus | 1125967 | Bacteria | Bacteria | 143 | 7.079999999999998e-41 | NR | WP_204516782.1 | 1125967 | g497 | i0 | 61.1 | 4.15430861723447 | 113 | 44 | 67.9 | 0 | 61 | 399 | 2 | 114 | WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus] | diamond | 2073 | 143 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus fulvus | ||
| 12658626 | 12658626 | PRJNA692200_S_NODE_13310_length_197_cov_18.331081_g13253_i0 | PRJNA692200 | 13310 | 197 | 18.331081 | 36.11222957 | Streptococcus | 1301 | Bacteria | Bacteria | 363 | 6.939999999999998e-96 | NTclustered | gi|2179903814|gb|CP046525.1| | 68892 | g13253 | i0 | 100 | 326.248730964467 | 196 | 0 | 99 | 0 | 1 | 196 | 141182 | 140987 | Streptococcus infantis strain SO chromosome, complete genome | blastn | 64271 | 363 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus infantis | ||
| 13933230 | 13933230 | PRJNA692200_S_NODE_15231_length_186_cov_6.437956_g15174_i0 | PRJNA692200 | 15231 | 186 | 6.437956 | 11.97459816 | Abiotrophia | 46123 | Bacteria | Bacteria | 344 | 2.34e-90 | NTclustered | gi|1848537030|gb|CP053988.1| | 46125 | g15174 | i0 | 100 | 543.801075268817 | 186 | 0 | 100 | 0 | 1 | 186 | 863436 | 863621 | Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome | blastn | 101147 | 344 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Abiotrophia | Abiotrophia defectiva | ||
| 13933256 | 13933256 | PRJNA692200_S_NODE_2691_length_351_cov_14.033113_g2634_i0 | PRJNA692200 | 2691 | 351 | 14.033113 | 49.25622663 | Streptococcus | 1301 | Bacteria | Bacteria | 593 | 4.389999999999998e-165 | NTclustered | gi|1140122741|gb|CP019562.1| | 1303 | g2634 | i0 | 99.691 | 314.105413105413 | 324 | 1 | 92 | 0 | 27 | 350 | 1571278 | 1571601 | Streptococcus oralis strain S.MIT/ORALIS-351 chromosome, complete genome | blastn | 110251 | 593 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 14701710 | 14701710 | PRJNA692200_S_NODE_19012_length_169_cov_3.816667_g18955_i0 | PRJNA692200 | 19012 | 169 | 3.816667 | 6.45016723 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2702800439|gb|CP148701.1| | 1502 | g18955 | i0 | 100 | 0.177514792899408 | 30 | 0 | 18 | 0 | 12 | 41 | 502669 | 502640 | Clostridium perfringens strain Z1322PCP0092 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 15207823 | 15207823 | PRJNA692200_S_NODE_10432_length_219_cov_4.505882_g10375_i0 | PRJNA692200 | 10432 | 219 | 4.505882 | 9.86788158 | Staphylococcus | 1279 | Bacteria | Bacteria | 392 | 1.01e-104 | NTclustered | gi|1042399372|gb|KU555869.1| | 28035 | g10375 | i0 | 99.535 | 489.744292237443 | 215 | 1 | 98 | 0 | 5 | 219 | 705 | 491 | Staphylococcus lugdunensis strain SLG13971-4 16S-23S ribosomal RNA intergenic spacer gene, region | blastn | 107254 | 392 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus lugdunensis | ||
| 16482086 | 16482086 | PRJNA692200_S_NODE_18353_length_172_cov_1.650407_g18296_i0 | PRJNA692200 | 18353 | 172 | 1.650407 | 2.83870004 | FCB group | 1783270 | Bacteria | Bacteria | 313 | 5.989999999999998e-81 | NTclustered | gi|2800799246|gb|CP093959.1| | 1358 | g18296 | i0 | 99.419 | 510.860465116279 | 172 | 1 | 100 | 0 | 1 | 172 | 522031 | 521860 | Lactococcus lactis strain FAM 17919 chromosome, complete genome | blastn | 87868 | 313 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | Lactococcus lactis | ||
| 16482089 | 16482089 | PRJNA692200_S_NODE_19013_length_169_cov_3.783333_g18956_i0 | PRJNA692200 | 19013 | 169 | 3.783333 | 6.39383277 | Streptococcus | 1301 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g18956 | i0 | 100 | 568.07100591716 | 169 | 0 | 100 | 0 | 1 | 169 | 16847 | 16679 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 96004 | 313 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 17250376 | 17250376 | PRJNA692200_S_NODE_10154_length_222_cov_2.098266_g10097_i0 | PRJNA692200 | 10154 | 222 | 2.098266 | 4.65815052 | Finegoldia magna | 1260 | Bacteria | Bacteria | 399 | 6.099999999999999e-107 | NTclustered | gi|2831269597|gb|CP170999.1| | 1260 | g10097 | i0 | 99.103 | 32.6531531531532 | 223 | 1 | 100 | 1 | 1 | 222 | 1362698 | 1362476 | Finegoldia magna strain WGS1513 chromosome, complete genome | blastn | 7249 | 399 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 19030925 | 19030925 | PRJNA692200_S_NODE_12635_length_202_cov_1.934641_g12578_i0 | PRJNA692200 | 12635 | 202 | 1.934641 | 3.90797482 | Streptococcus | 1301 | Bacteria | Bacteria | 76.8 | 1.04e-9 | NTclustered | gi|21666288|gb|AF389514.1| | 1335 | g12578 | i0 | 87.692 | 12.4257425742574 | 65 | 8 | 32 | 0 | 125 | 189 | 652 | 588 | Streptococcus bovis GroES gene, complete cds; and GroEL gene, partial cds | blastn | 2510 | 76.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus equinus | ||
| 23625706 | 23625706 | PRJNA692200_S_NODE_7859_length_245_cov_630.494898_g7802_i0 | PRJNA692200 | 7859 | 245 | 630.494898 | 1544.7125001 | Gemella sanguinis | 84135 | Bacteria | Bacteria | 366 | 6.95e-97 | NTclustered | gi|1780450472|gb|CP046313.1| | 84135 | g7802 | i0 | 98.095 | 256.644897959184 | 210 | 4 | 86 | 0 | 36 | 245 | 519032 | 519241 | Gemella sanguinis strain FDAARGOS_742 chromosome, complete genome | blastn | 62878 | 366 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella sanguinis | ||
| 24899291 | 24899291 | PRJNA692200_S_NODE_7080_length_255_cov_1593.242718_g7023_i0 | PRJNA692200 | 7080 | 255 | 1593.242718 | 4062.7689309 | Paenibacillus azoreducens | 116718 | Bacteria | Bacteria | 180 | 1.02e-40 | NTclustered | gi|2168704082|dbj|AP025343.1| | 116718 | g7023 | i0 | 83.495 | 141.509803921569 | 206 | 21 | 80 | 11 | 1 | 198 | 994584 | 994784 | Paenibacillus azoreducens J34TS1 DNA, complete genome | blastn | 36085 | 180 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus azoreducens | ||
| 27114000 | 27114000 | PRJNA692200_S_NODE_13782_length_195_cov_1.267123_g13725_i0 | PRJNA692200 | 13782 | 195 | 1.267123 | 2.47088985 | Defluviitaleaceae bacterium | 2660712 | Bacteria | Bacteria | 41.6 | 0.0492 | NR | MCL2378803.1 | 2660712 | g13725 | i0 | 45.2 | 0.646153846153846 | 42 | 20 | 61.5 | 2 | 136 | 17 | 265 | 305 | MCL2378803.1 hypothetical protein [Defluviitaleaceae bacterium] | diamond | 126 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Defluviitaleaceae | Defluviitaleaceae bacterium | |||
| 27978269 | 27978269 | PRJNA692200_S_NODE_4105_length_309_cov_1.507692_g4048_i0 | PRJNA692200 | 4105 | 309 | 1.507692 | 4.65876828 | Peptostreptococcus | 1257 | Bacteria | Bacteria | 112 | 2.28e-29 | NR | WP_002845271.1 | 1257 | g4048 | i0 | 58.9 | 7.96116504854369 | 90 | 37 | 87.4 | 0 | 5 | 274 | 32 | 121 | WP_002845271.1 MULTISPECIES: RidA family protein [Peptostreptococcus] | diamond | 2460 | 112 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Peptostreptococcus | |||
| 28420522 | 28420522 | PRJNA692200_S_NODE_726_length_472_cov_4.680851_g688_i0 | PRJNA692200 | 726 | 472 | 4.680851 | 22.09361672 | root | 1 | Root_unresolved | Root_unresolved | 47.4 | 8.05e-4 | NR | MER2170548.1 | 126157 | g688 | i0 | 46.2 | 0.889830508474576 | 52 | 27 | 32.4 | 1 | 208 | 56 | 1 | 52 | MER2170548.1 hypothetical protein [Psychrobacillus psychrodurans] | diamond | 420 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Psychrobacillus | Psychrobacillus psychrodurans | ||
| 30335750 | 30335750 | PRJNA692200_S_NODE_20272_length_166_cov_1.384615_g20215_i0 | PRJNA692200 | 20272 | 166 | 1.384615 | 2.2984609 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 46.2 | 7.85e-4 | NR | MCH4039956.1 | 1898203 | g20215 | i0 | 40 | 0.903614457831325 | 50 | 30 | 90.4 | 0 | 16 | 165 | 153 | 202 | MCH4039956.1 glycosyltransferase [Lachnospiraceae bacterium] | diamond | 150 | 46.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 32074129 | 32074129 | PRJNA692200_S_NODE_9658_length_227_cov_1.612360_g9601_i0 | PRJNA692200 | 9658 | 227 | 1.61236 | 3.6600572 | Erysipelotrichaceae bacterium | 2049044 | Bacteria | Bacteria | 45.4 | 0.003 | NR | MEA5018092.1 | 2049044 | g9601 | i0 | 50 | 0.475770925110132 | 36 | 18 | 47.6 | 0 | 222 | 115 | 188 | 223 | MEA5018092.1 dienelactone hydrolase family protein [Erysipelotrichaceae bacterium] | diamond | 108 | 45.4 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;