RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA692200", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27567737 27567737 PRJNA692200_S_NODE_22124_length_162_cov_0.893805_g22067_i0 PRJNA692200 22124 162 0.893805 1.4479641 Syndiniales 88547 SAR_Eukaryotes SAR_Eukaryotes 67.8 1.78e-11   NR ETO34620.1 46433 g22067 i0 55.8 9.61111111111111 52 23 96.3 0 160 5 151 202 ETO34620.1 hypothetical protein RFI_02472 [Reticulomyxa filosa] diamond 1557 67.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29356303 29356303 PRJNA692200_S_NODE_19629_length_168_cov_0.873950_g19572_i0 PRJNA692200 19629 168 0.87395 1.468236 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 52 7.16e-6   NR ETO26161.1 46433 g19572 i0 49.1 2.875 53 25 94.6 1 2 160 68 118 ETO26161.1 hypothetical protein RFI_10971 [Reticulomyxa filosa] diamond 483 52 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;