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contig_metadata

21 rows where bioproject = "PRJNA692200" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA692200 · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672898 672898 PRJNA692200_S_NODE_4101_length_309_cov_3.088462_g4044_i0 PRJNA692200 4101 309 3.088462 9.54334758 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 93.5 1.7e-14   NTclustered gi|85062629|gb|DQ340387.1| 142831 g4044 i0 88.312 25.9805825242718 77 9 25 0 103 179 12524 12448 Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and 26S ribosomal RNA genes, complete sequence blastn 8028 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
8325717 8325717 PRJNA692200_S_NODE_13887_length_194_cov_2.179310_g13830_i0 PRJNA692200 13887 194 2.17931 4.2278614 Heterostelium album 2086695 Evosea other_Eukaryota 75 3.57e-9   NTclustered gi|1160561078|ref|XM_020578754.1| 670386 g13830 i0 93.878 0.860824742268041 49 3 25 0 7 55 181 229 Polysphondylium pallidum PN500 ubiquitin (ubqD), partial mRNA blastn 167 75 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
9601158 9601158 PRJNA692200_S_NODE_18528_length_171_cov_2.827869_g18471_i0 PRJNA692200 18528 171 2.827869 4.83565599 Dictyostelium purpureum 5786 Evosea other_Eukaryota 163 6.34e-36   NTclustered gi|330842931|ref|XM_003293373.1| 5786 g18471 i0 93.578 35.0058479532164 109 7 64 0 59 167 1089 981 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_90232), partial mRNA blastn 5986 163 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
10107958 10107958 PRJNA692200_S_NODE_688_length_475_cov_137.762911_g650_i0 PRJNA692200 688 475 137.762911 654.37382725 Arcyria 137620 Evosea other_Eukaryota 756 0   NTclustered gi|24711448|gb|AY145523.1| 137621 g650 i0 98.821 81.6252631578947 424 5 89 0 50 473 1064 641 Arcyria cinerea 18S ribosomal RNA gene, partial sequence blastn 38772 756 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Arcyria Arcyria cinerea
12151852 12151852 PRJNA692200_S_NODE_15830_length_184_cov_1.148148_g15773_i0 PRJNA692200 15830 184 1.148148 2.11259232 Korotnevella venosa 1970483 Discosea other_Eukaryota 135 1.51e-27   NTclustered gi|1047608806|gb|KU681502.1| 1970483 g15773 i0 91.176 50.8152173913044 102 6 54 2 80 178 850 951 Korotnevella venosa clone 154.2_63.5 18S ribosomal RNA gene, complete sequence blastn 9350 135 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella venosa
16482127 16482127 PRJNA692200_S_NODE_8373_length_240_cov_1.596859_g8316_i0 PRJNA692200 8373 240 1.596859 3.8324616 Cavenderia fasciculata 261658 Evosea other_Eukaryota 114 2.96e-27   NR XP_004359557.1 261658 g8316 i0 71.1 2.85 76 22 95 0 3 230 596 671 XP_004359557.1 succinate dehydrogenase [Cavenderia fasciculata] diamond 684 114 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
18524570 18524570 PRJNA692200_S_NODE_13675_length_195_cov_5.589041_g13618_i0 PRJNA692200 13675 195 5.589041 10.89862995 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 335 1.4899999999999997e-87   NTclustered gi|861553759|gb|KP719186.1| 1678066 g13618 i0 98.93 39.7333333333333 187 2 96 0 7 193 264 78 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 7748 335 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
18524824 18524824 PRJNA692200_S_NODE_3215_length_333_cov_2.017606_g3158_i0 PRJNA692200 3215 333 2.017606 6.71862798 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 230 1.3499999999999995e-55   NTclustered gi|221185864|gb|FJ577811.1| 590481 g3158 i0 94.595 35.2072072072072 148 8 44 0 167 314 575 428 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 11724 230 1 Eukaryota Amoebozoa             uncultured Amoebozoa
18524997 18524997 PRJNA692200_S_NODE_8415_length_239_cov_6.721053_g8358_i0 PRJNA692200 8415 239 6.721053 16.06331667 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 174 4.39e-39   NTclustered gi|292559443|ref|NC_013986.1| 5778 g8358 i0 84.066 248.058577405858 182 27 76 2 47 227 27531 27351 Hartmannella vermiformis mitochondrion, complete genome blastn 59286 174 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20305629 20305629 PRJNA692200_S_NODE_10256_length_221_cov_1.790698_g10199_i0 PRJNA692200 10256 221 1.790698 3.95744258 Eumycetozoa 142796 Evosea other_Eukaryota 281 2.29e-71   NTclustered gi|2524154319|gb|OR186216.1| 226008 g10199 i0 98.734 73.5158371040724 158 2 71 0 64 221 887 1044 Fuligo gyrosa strain IAAM-W0002 small subunit ribosomal RNA gene, partial sequence blastn 16247 281 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo gyrosa
20305680 20305680 PRJNA692200_S_NODE_7636_length_248_cov_4.045226_g7579_i0 PRJNA692200 7636 248 4.045226 10.03216048 Ripella 1217112 Discosea other_Eukaryota 187 5.8899999999999985e-43   NTclustered gi|1269228365|gb|MF683490.1| 2047821 g7579 i0 82.273 78.1290322580645 220 35 88 4 31 247 1382 1164 Ripella platypodia clone 26.9.22 18S ribosomal RNA gene, partial sequence blastn 19376 187 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
21075311 21075311 PRJNA692200_S_NODE_3717_length_318_cov_6.910781_g3660_i0 PRJNA692200 3717 318 6.910781 21.97628358 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 151 2.1799999999999994e-42   NR XP_004356622.1 1257118 g3660 i0 83.5 0.80188679245283 85 14 80.2 0 316 62 231 315 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 255 151 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22350265 22350265 PRJNA692200_S_NODE_5698_length_276_cov_4.061674_g5641_i0 PRJNA692200 5698 276 4.061674 11.21022024 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.007   NTclustered gi|1160555684|ref|XM_020573667.1| 670386 g5641 i0 96.875 0.536231884057971 32 1 12 0 15 46 1694 1725 Polysphondylium pallidum PN500 sumo-activating enzyme subunit 2 (uba2), partial mRNA blastn 148 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24898921 24898921 PRJNA692200_S_NODE_14620_length_190_cov_1.014184_g14563_i0 PRJNA692200 14620 190 1.014184 1.9269496 Acanthamoeba pearcei 65662 Discosea other_Eukaryota 163 7.23e-36   NTclustered gi|291092747|gb|GU573879.1| 65662 g14563 i0 83.721 91.9631578947368 172 28 91 0 10 181 131 302 Acanthamoeba pearcei isolate C18/PHTC 18S ribosomal RNA gene, partial sequence blastn 17473 163 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba pearcei
26702556 26702556 PRJNA692200_S_NODE_19901_length_167_cov_1.381356_g19844_i0 PRJNA692200 19901 167 1.381356 2.30686452 Entamoeba histolytica HM-1:IMSS 294381 Evosea other_Eukaryota 61.6 2.89e-9   NR XP_654998.1 294381 g19844 i0 51.9 2.80239520958084 52 25 93.4 0 166 11 408 459 XP_654998.1 alanyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS] diamond 468 61.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
27461946 27461946 PRJNA692200_S_NODE_18123_length_173_cov_1.637097_g18066_i0 PRJNA692200 18123 173 1.637097 2.83217781 Polysphondylium violaceum 133409 Evosea other_Eukaryota 42 0.018   NR KAF2073891.1 133409 g18066 i0 71.4 0.364161849710983 21 6 36.4 0 1 63 144 164 KAF2073891.1 hypothetical protein CYY_004815 [Polysphondylium violaceum] diamond 63 42 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30177281 30177281 PRJNA692200_S_NODE_14612_length_190_cov_1.078014_g14555_i0 PRJNA692200 14612 190 1.078014 2.0482266 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 74.7 9.59e-14   NR PRP86442.1 1890364 g14555 i0 73.3 0.710526315789474 45 12 71.1 0 6 140 144 188 PRP86442.1 hypothetical protein PROFUN_05361 [Planoprotostelium fungivorum] diamond 135 74.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30208702 30208702 PRJNA692200_S_NODE_22132_length_162_cov_0.893805_g22075_i0 PRJNA692200 22132 162 0.893805 1.4479641 Entamoeba histolytica 5759 Evosea other_Eukaryota 57.4 5.6e-8   NR AAF73892.1 5759 g22075 i0 50.8 2.18518518518519 59 23 98.1 1 3 161 173 231 AAF73892.1 enhancer binding protein-1 [Entamoeba histolytica] diamond 354 57.4 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
30462158 30462158 PRJNA692200_S_NODE_17893_length_174_cov_1.512000_g17836_i0 PRJNA692200 17893 174 1.512 2.63088 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.9 2.8e-8   NR XP_004368092.1 1257118 g17836 i0 59.2 0.844827586206897 49 18 84.5 1 173 27 479 525 XP_004368092.1 GTPase of unknown function subfamily protein [Acanthamoeba castellanii str. Neff] diamond 147 58.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30556313 30556313 PRJNA692200_S_NODE_15773_length_184_cov_1.911111_g15716_i0 PRJNA692200 15773 184 1.911111 3.51644424 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 46.2 0.00103   NR XP_012755097.1 1410327 g15716 i0 48 1.48369565217391 50 26 81.5 0 151 2 108 157 XP_012755097.1 hypothetical protein SAMD00019534_051720 [Acytostelium subglobosum LB1] diamond 273 46.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32611779 32611779 PRJNA692200_S_NODE_20400_length_166_cov_0.888889_g20343_i0 PRJNA692200 20400 166 0.888889 1.47555574 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 71.2 6.3e-14   NR KAH3761877.1 1580589 g20343 i0 59.3 0.975903614457831 54 22 97.6 0 162 1 81 134 KAH3761877.1 multiprotein-bridging factor 1b [Pelomyxa schiedti] diamond 162 71.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;