RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA691918", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA691918 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672508 672508 PRJNA691918_S_NODE_201_length_194_cov_18764.883436_g200_i0 PRJNA691918 201 194 18764.883436 36403.87386584 Vannella samoroda 2591203 Discosea other_Eukaryota 244 2.57e-60   NTclustered gi|1759423687|gb|MK992743.1| 2591203 g200 i0 96.599 75.5360824742268 147 5 76 0 48 194 464 318 Vannella samoroda strain RC CCMAm 0457 clone 6 18S small subunit ribosomal RNA gene, partial sequence blastn 14654 244 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella samoroda
21074944 21074944 PRJNA691918_S_NODE_77_length_235_cov_6.588235_g76_i0 PRJNA691918 77 235 6.588235 15.48235225 Vannella mustalahtiana 2841357 Discosea other_Eukaryota 429 8.33e-116   NTclustered gi|2047416623|gb|MZ329078.1| 2841357 g76 i0 99.574 101.48085106383 235 1 100 0 1 235 1037 803 Vannella sp. AKud-2021a clone NGD3297 small subunit ribosomal RNA gene, partial sequence blastn 23848 429 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella mustalahtiana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;