RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA690592" and tax_phylum = "candidate division WOR-3"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA690592 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9600417 9600417 PRJNA690592_S_NODE_72828_length_374_cov_1.172757_g71814_i0 PRJNA690592 72828 374 1.172757 4.38611118 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 60.2 2.13e-4   NTclustered gi|2108202650|gb|CP070705.1| 2052148 g71814 i0 100 8.29144385026738 32 0 9 0 238 269 1742701 1742670 MAG: candidate division WOR-3 bacterium isolate bin53 chromosome blastn 3101 60.2 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
27367203 27367203 PRJNA690592_S_NODE_165543_length_265_cov_1.203125_g164529_i0 PRJNA690592 165543 265 1.203125 3.18828125 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 55.8 3.07e-7   NR RKX70132.1 2052148 g164529 i0 50.9 0.622641509433962 55 27 62.3 0 4 168 105 159 RKX70132.1 MAG: hypothetical protein DRP53_06025 [candidate division WOR-3 bacterium] diamond 165 55.8 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
28409001 28409001 PRJNA690592_S_NODE_5486_length_1157_cov_5.638376_g4961_i0 PRJNA690592 5486 1157 5.638376 65.23601032 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 162 4.25e-42   NR MEO0089877.1 2052148 g4961 i0 32.2 3.79602420051858 363 229 91.5 8 1107 49 22 377 MEO0089877.1 serpin family protein [candidate division WOR-3 bacterium] diamond 4392 162 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
31694352 31694352 PRJNA690592_S_NODE_40657_length_481_cov_1.637255_g39643_i0 PRJNA690592 40657 481 1.637255 7.87519655 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 48.5 0.00161   NR HDL60137.1 2052148 g39643 i0 47.4 0.355509355509356 57 24 35.6 2 237 407 75 125 HDL60137.1 nicotinamidase [candidate division WOR-3 bacterium] diamond 171 48.5 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;