RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA690592", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690592 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26872731 26872731 PRJNA690592_S_NODE_79361_length_360_cov_1.797909_g78347_i0 PRJNA690592 79361 360 1.797909 6.4724724 Fervidicoccus 685950 Archaea Archaea 90.9 1.37e-18   NR WP_148683570.1 683846 g78347 i0 41.8 8.25 110 61 91.7 2 360 31 114 220 WP_148683570.1 translation elongation factor EF-1 subunit alpha [Fervidicoccus fontis] diamond 2970 91.3 0.995618838992333 Archaea   Thermoproteati Thermoproteota Thermoprotei Fervidicoccales Fervidicoccaceae Fervidicoccus Fervidicoccus fontis
32073972 32073972 PRJNA690592_S_NODE_140438_length_285_cov_1.165094_g139424_i0 PRJNA690592 140438 285 1.165094 3.3205179 Thermoprotei archaeon 2250277 Archaea Archaea 109 3.0100000000000004e-27   NR RLE57769.1 2250277 g139424 i0 57.5 3.74736842105263 87 37 91.6 0 21 281 8 94 RLE57769.1 MAG: proteasome endopeptidase complex, archaeal, alpha subunit [Thermoprotei archaeon] diamond 1068 109 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
32073973 32073973 PRJNA690592_S_NODE_14058_length_783_cov_3.295775_g13188_i0 PRJNA690592 14058 783 3.295775 25.80591825 Aeropyrum sp. 1872399 Archaea Archaea 59.7 1.79e-6   NR MCE4610635.1 1872399 g13188 i0 34.9 0.406130268199234 106 61 40.6 2 386 703 151 248 MCE4610635.1 DUF3782 domain-containing protein [Aeropyrum sp.] diamond 318 59.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Aeropyrum Aeropyrum sp.
32200687 32200687 PRJNA690592_S_NODE_72138_length_375_cov_1.907285_g71124_i0 PRJNA690592 72138 375 1.907285 7.15231875 Desulfurococcaceae archaeon 2184738 Archaea Archaea 69.7 4.19e-12   NR MEM4534896.1 2184738 g71124 i0 39.8 0.784 98 52 77.6 2 365 75 57 148 MEM4534896.1 spore coat U domain-containing protein [Desulfurococcaceae archaeon] diamond 294 69.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;