RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA690592", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Lenarviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690592 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4499119 4499119 PRJNA690592_S_NODE_154244_length_273_cov_22.050000_g153230_i0 PRJNA690592 154244 273 22.05 60.1965 Chronazanb virus 3129852 Viruses Viruses 147 1.12e-30   NTclustered gi|2717318485|gb|PP172249.1| 3129852 g153230 i0 96.591 21.5714285714286 88 3 32 0 40 127 4485 4398 MAG: Chronazanb virus isolate CN1B_k141_35798 genomic sequence blastn 5889 147 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazanb virus
5775625 5775625 PRJNA690592_S_NODE_91425_length_339_cov_3.687970_g90411_i0 PRJNA690592 91425 339 3.68797 12.5022183 Chrocagosk virus 3129397 Viruses Viruses 215 3.86e-51   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g90411 i0 98.361 36.3038348082596 122 2 36 0 1 122 205 326 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 12307 215 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
13424735 13424735 PRJNA690592_S_NODE_136271_length_288_cov_10.967442_g135257_i0 PRJNA690592 136271 288 10.967442 31.58623296 Chrocagosk virus 3129397 Viruses Viruses 364 3.0099999999999993e-96   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g135257 i0 92.857 19.3854166666667 252 17 88 1 1 252 251 1 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 5583 364 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
23623691 23623691 PRJNA690592_S_NODE_126719_length_297_cov_2.745536_g125705_i0 PRJNA690592 126719 297 2.745536 8.15424192 Chrocagosk virus 3129397 Viruses Viruses 228 4.269999999999999e-55   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g125705 i0 83.142 28.023569023569 261 33 88 7 38 297 1 251 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 8323 228 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
27398720 27398720 PRJNA690592_S_NODE_48803_length_444_cov_1.646900_g47789_i0 PRJNA690592 48803 444 1.6469 7.312236 Downy mildew lesion associated splipalmivirus 44 3070776 Viruses Viruses 232 1.87e-75   NR WNA22226.1 3070776 g47789 i0 81.6 1.83783783783784 136 25 91.9 0 35 442 1 136 WNA22226.1 MAG: hypothetical protein [Downy mildew lesion associated splipalmivirus 44] diamond 816 232 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Downy mildew lesion associated splipalmivirus 44
27430323 27430323 PRJNA690592_S_NODE_147483_length_279_cov_1.194175_g146469_i0 PRJNA690592 147483 279 1.194175 3.33174825 ssRNA phage SRR5466338_2 2786391 Viruses Viruses 54.7 3.39e-6   NR YP_010769838.1 2786391 g146469 i0 55.6 1.63440860215054 45 19 48.4 1 224 90 171 214 YP_010769838.1 maturation protein [ssRNA phage SRR5466338_2] diamond 456 54.7 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Rusvolovirus Rusvolovirus asiadaptatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;