RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA690592" and tax_phylum = "Gastrotricha"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gastrotricha · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
671578 671578 PRJNA690592_S_NODE_21921_length_639_cov_4.625442_g20944_i0 PRJNA690592 21921 639 4.625442 29.55657438 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 760 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g20944 i0 88.106 3.92175273865415 639 76 100 0 1 639 10940 10302 Lepidodermella squamata mitochondrion, complete genome blastn 2506 760 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
1946730 1946730 PRJNA690592_S_NODE_101822_length_325_cov_1.773810_g100808_i0 PRJNA690592 101822 325 1.77381 5.7648825 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 313 1.27e-80   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g100808 i0 84.049 3.78153846153846 326 50 100 2 1 325 4095 3771 Lepidodermella squamata mitochondrion, complete genome blastn 1229 313 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
1948000 1948000 PRJNA690592_S_NODE_7482_length_1024_cov_3.382755_g6850_i0 PRJNA690592 7482 1024 3.382755 34.6394112 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1074 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g6850 i0 85.785 9.9560546875 1013 144 99 0 12 1024 2919 1907 Lepidodermella squamata mitochondrion, complete genome blastn 10195 1074 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
7556937 7556937 PRJNA690592_S_NODE_214786_length_241_cov_1.232143_g213772_i0 PRJNA690592 214786 241 1.232143 2.96946463 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 144 1.42e-38   NR YP_009136573.1 1194616 g213772 i0 97.4 0.95850622406639 77 2 95.9 0 11 241 207 283 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 231 144 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
8324828 8324828 PRJNA690592_S_NODE_36707_length_503_cov_5.232558_g35697_i0 PRJNA690592 36707 503 5.232558 26.31976674 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 636 1.0699999999999998e-177   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g35697 i0 89.463 2.26640159045726 503 53 100 0 1 503 9534 10036 Lepidodermella squamata mitochondrion, complete genome blastn 1140 636 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
9599352 9599352 PRJNA690592_S_NODE_121368_length_303_cov_1.182609_g120354_i0 PRJNA690592 121368 303 1.182609 3.58330527 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 538 1.7799999999999995e-148   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g120354 i0 98.684 20.1980198019802 304 3 100 1 1 303 7997 8300 Lepidodermella squamata mitochondrion, complete genome blastn 6120 538 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
9599985 9599985 PRJNA690592_S_NODE_212708_length_242_cov_0.911243_g211694_i0 PRJNA690592 212708 242 0.911243 2.20520806 Chaetonotus sp. p AK-2024 3232324 Gastrotricha other_Eukaryota 108 4.59e-19   NTclustered gi|2758337515|gb|PQ009211.1| 3232324 g211694 i0 100 25.603305785124 58 0 24 0 1 58 2522 2465 Chaetonotus sp. p AK-2024 voucher W6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6196 108 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Chaetonotus Chaetonotus sp. p AK-2024
10876174 10876174 PRJNA690592_S_NODE_93309_length_337_cov_1.079545_g92295_i0 PRJNA690592 93309 337 1.079545 3.63806665 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 601 2.52e-167   NTclustered gi|478683567|gb|KC193103.1| 1194616 g92295 i0 98.813 100.121661721068 337 4 100 0 1 337 2492 2156 Lepidodermella squamata 28S ribosomal RNA gene, partial sequence blastn 33741 601 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
15973494 15973494 PRJNA690592_S_NODE_11093_length_868_cov_4.901887_g10308_i0 PRJNA690592 11093 868 4.901887 42.54837916 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 994 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g10308 i0 87.342 2.00691244239631 869 109 100 1 1 868 7565 6697 Lepidodermella squamata mitochondrion, complete genome blastn 1742 994 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
23624644 23624644 PRJNA690592_S_NODE_6519_length_1082_cov_223.839445_g5933_i0 PRJNA690592 6519 1082 223.839445 2421.9427949 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1886 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g5933 i0 98.327 4.12661737523105 1076 17 99 1 3 1077 8387 9462 Lepidodermella squamata mitochondrion, complete genome blastn 4465 1886 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
24897840 24897840 PRJNA690592_S_NODE_2280_length_1576_cov_4.391218_g1965_i0 PRJNA690592 2280 1576 4.391218 69.20559568 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 1953 0   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g1965 i0 89.165 44.6142131979695 1569 166 99 3 8 1573 12781 14348 Lepidodermella squamata mitochondrion, complete genome blastn 70312 1953 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
24898455 24898455 PRJNA690592_S_NODE_99540_length_328_cov_1.607843_g98526_i0 PRJNA690592 99540 328 1.607843 5.27372504 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 278 4.68e-70   NTclustered gi|817528470|ref|NC_026985.1| 1194616 g98526 i0 82.243 3.1859756097561 321 57 98 0 4 324 1134 814 Lepidodermella squamata mitochondrion, complete genome blastn 1045 278 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
27145300 27145300 PRJNA690592_S_NODE_30322_length_550_cov_1.756813_g29318_i0 PRJNA690592 30322 550 1.756813 9.6624715 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 278 4.7e-89   NR YP_009136572.1 1194616 g29318 i0 98.1 0.845454545454545 155 3 84.5 0 85 549 254 408 YP_009136572.1 NADH dehydrogenase subunit 4 [Lepidodermella squamata] diamond 465 278 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
28566737 28566737 PRJNA690592_S_NODE_208767_length_243_cov_1.358824_g207753_i0 PRJNA690592 208767 243 1.358824 3.30194232 Litigonotus ghinii 3104745 Gastrotricha other_Eukaryota 124 1.2499999999999998e-32   NR XCN99742.1 3104745 g207753 i0 78.5 0.975308641975309 79 17 97.5 0 239 3 10 88 XCN99742.1 NADH dehydrogenase subunit 2 [Litigonotus ghinii] diamond 237 124 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Litigonotus Litigonotus ghinii
31757675 31757675 PRJNA690592_S_NODE_68697_length_383_cov_1.680645_g67683_i0 PRJNA690592 68697 383 1.680645 6.43687035 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 224 3.2e-68   NR YP_009136573.1 1194616 g67683 i0 95.3 0.994778067885117 127 6 99.5 0 3 383 13 139 YP_009136573.1 NADH dehydrogenase subunit 5 [Lepidodermella squamata] diamond 381 224 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata
32769045 32769045 PRJNA690592_S_NODE_43240_length_468_cov_1.987342_g42226_i0 PRJNA690592 43240 468 1.987342 9.30076056 Lepidodermella squamata 1194616 Gastrotricha other_Eukaryota 216 5.59e-67   NR YP_009136579.1 1194616 g42226 i0 91.4 0.82051282051282 128 11 82.1 0 8 391 164 291 YP_009136579.1 NADH dehydrogenase subunit 2 [Lepidodermella squamata] diamond 384 216 1 Eukaryota Opisthokonta Metazoa Gastrotricha   Chaetonotida Chaetonotidae Lepidodermella Lepidodermella squamata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;