RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA690592" and tax_phylum = "Candidatus Freyarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Freyarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690592 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29072223 29072223 PRJNA690592_S_NODE_77668_length_363_cov_3.244828_g76654_i0 PRJNA690592 77668 363 3.244828 11.77872564 Candidatus Freyrarchaeum guaymasense 3036978 Archaea Archaea 75.1 1.05e-13   NR MEX2706285.1 3036978 g76654 i0 34.7 1.79338842975207 101 65 82.6 1 343 44 9 109 MEX2706285.1 Rab family GTPase [Candidatus Freyrarchaeum guaymaensis] diamond 651 75.1 1 Archaea   Promethearchaeati Candidatus Freyarchaeota Candidatus Freyrarchaeia Candidatus Freyrarchaeales Candidatus Freyrarchaeaceae Candidatus Freyrarchaeum Candidatus Freyrarchaeum guaymasense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;