RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA690592" and tax_phylum = "Candidatus Elulimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Elulimicrobiota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA690592 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28314216 28314216 PRJNA690592_S_NODE_141686_length_284_cov_1.094787_g140672_i0 PRJNA690592 141686 284 1.094787 3.10919508 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 54.7 3.57e-6   NR NBP58348.1 2802965 g140672 i0 39.5 0.802816901408451 76 35 73.9 3 7 216 278 348 NBP58348.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 228 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29198427 29198427 PRJNA690592_S_NODE_203009_length_245_cov_1.244186_g201995_i0 PRJNA690592 203009 245 1.244186 3.0482557 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 54.7 2.23e-6   NR NBP58348.1 2802965 g201995 i0 40.6 0.783673469387755 64 36 77.1 2 219 31 286 348 NBP58348.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 192 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
29608398 29608398 PRJNA690592_S_NODE_40050_length_484_cov_1.907543_g39037_i0 PRJNA690592 40050 484 1.907543 9.23250812 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 65.1 6.18e-9   NR NBP58348.1 2802965 g39037 i0 35 0.638429752066116 103 60 63.2 3 8 313 254 350 NBP58348.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 309 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;