RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA690592", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA690592 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15973699 15973699 PRJNA690592_S_NODE_140453_length_285_cov_1.122642_g139439_i0 PRJNA690592 140453 285 1.122642 3.1995297 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 56.5 0.002   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g139439 i0 100 0.105263157894737 30 0 11 0 212 241 7806490 7806519 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 30 56.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
28187714 28187714 PRJNA690592_S_NODE_58206_length_411_cov_3.470414_g57192_i0 PRJNA690592 58206 411 3.470414 14.26340154 Candidatus Elarobacter sp. 3047550 Bacteria Bacteria 65.9 1.8e-9   NR HEY4442312.1 3047550 g57192 i0 51 0.372262773722628 51 25 37.2 0 3 155 315 365 HEY4442312.1 PHB depolymerase family esterase [Candidatus Elarobacter sp.] diamond 153 65.9 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Elarobacter Candidatus Elarobacter sp.
29513826 29513826 PRJNA690592_S_NODE_192470_length_249_cov_0.875000_g191456_i0 PRJNA690592 192470 249 0.875 2.17875 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 75.1 1.38e-13   NR HXW56215.1 2952917 g191456 i0 52.4 1.53012048192771 63 30 75.9 0 17 205 342 404 HXW56215.1 glycoside hydrolase family 27 protein [Candidatus Cybelea sp.] diamond 381 75.1 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;