RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA690592" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 5 ✖

bioproject 1

  • PRJNA690592 · 5 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29545470 29545470 PRJNA690592_S_NODE_221210_length_200_cov_5.724409_g220196_i0 PRJNA690592 221210 200 5.724409 11.448818 Solumvirus sp. 2487773 Viruses Viruses 51.2 1.5e-5   NR AYV86227.1 2487773 g220196 i0 77.1 0.525 35 6 52.5 1 1 105 153 185 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 105 51.2 1 Viruses Pithoviruses             Solumvirus sp.
29987732 29987732 PRJNA690592_S_NODE_181271_length_254_cov_1.276243_g180257_i0 PRJNA690592 181271 254 1.276243 3.24165722 Pithovirus LCPAC4 2506596 Viruses Viruses 107 1.97e-25   NR QBK93291.1 2506596 g180257 i0 57.7 1.84251968503937 78 33 92.1 0 20 253 112 189 QBK93291.1 MAG: polynucleotide kinase 3 phosphatase [Pithovirus LCPAC403] diamond 468 107 1 Viruses Pithoviruses             Pithovirus LCPAC403
30619571 30619571 PRJNA690592_S_NODE_5753_length_1136_cov_8.790216_g5211_i0 PRJNA690592 5753 1136 8.790216 99.85685376 Pithovirus LCPAC1 2506586 Viruses Viruses 177 7.559999999999999e-48   NR QBK89990.1 2506586 g5211 i0 33.4 0.932218309859155 353 197 84.5 8 143 1102 46 393 QBK89990.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 1059 177 1 Viruses Pithoviruses             Pithovirus LCPAC101
30904100 30904100 PRJNA690592_S_NODE_42214_length_473_cov_2.082500_g41200_i0 PRJNA690592 42214 473 2.0825 9.850225 Solumvirus sp. 2487773 Viruses Viruses 182 8.989999999999996e-55   NR AYV86227.1 2487773 g41200 i0 64.1 0.919661733615222 145 49 90.1 1 427 2 28 172 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 435 182 1 Viruses Pithoviruses             Solumvirus sp.
31568037 31568037 PRJNA690592_S_NODE_120856_length_303_cov_2.000000_g119842_i0 PRJNA690592 120856 303 2 6.06 Solumvirus sp. 2487773 Viruses Viruses 150 3.5399999999999992e-43   NR AYV86227.1 2487773 g119842 i0 75.5 0.930693069306931 94 21 93.1 1 3 284 94 185 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 282 150 1 Viruses Pithoviruses             Solumvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;