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contig_metadata

28 rows where bioproject = "PRJNA690592", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 28 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 28 ✖

bioproject 1

  • PRJNA690592 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7049652 7049652 PRJNA690592_S_NODE_148246_length_278_cov_1.878049_g147232_i0 PRJNA690592 148246 278 1.878049 5.22097622 root 1 Root_unresolved Root_unresolved 119 2.6499999999999996e-31   NR HXF29851.1 2047757 g147232 i0 66.3 7.2841726618705 86 29 92.8 0 277 20 119 204 HXF29851.1 superoxide dismutase [Chlamydiales bacterium] diamond 2025 119 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
12150849 12150849 PRJNA690592_S_NODE_26690_length_583_cov_2.964706_g25696_i0 PRJNA690592 26690 583 2.964706 17.28423598 Chlamydiia bacterium 2052156 Bacteria Bacteria 213 2.02e-65   NR MCB1117595.1 2052156 g25696 i0 56.6 4.53344768439108 175 70 90.1 3 582 58 142 310 MCB1117595.1 phosphoenolpyruvate carboxykinase (GTP) [Chlamydiia bacterium] diamond 2643 213 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
13425368 13425368 PRJNA690592_S_NODE_217351_length_237_cov_2.347561_g216337_i0 PRJNA690592 217351 237 2.347561 5.56371957 Chlamydiales bacterium 2047757 Bacteria Bacteria 110 2.63e-28   NR MCH9627218.1 2047757 g216337 i0 61.5 3.9493670886076 78 30 98.7 0 236 3 47 124 MCH9627218.1 Superoxide dismutase [Mn/Fe] [Chlamydiales bacterium] diamond 936 110 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
13425554 13425554 PRJNA690592_S_NODE_39411_length_488_cov_1.296386_g38399_i0 PRJNA690592 39411 488 1.296386 6.32636368 Chlamydiales bacterium CRIB33 553509 Bacteria Bacteria 739 0   NTclustered gi|196051292|gb|EU683887.1| 553509 g38399 i0 94.07 110.665983606557 489 26 100 3 1 488 21 507 Chlamydiales bacterium CRIB33 16S ribosomal RNA gene, partial sequence blastn 54005 739 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium CRIB33
19798029 19798029 PRJNA690592_S_NODE_159836_length_269_cov_1.571429_g158822_i0 PRJNA690592 159836 269 1.571429 4.22714401 uncultured Chlamydiales bacterium 174324 Bacteria Bacteria 54.7 0.007   NTclustered gi|2874253712|emb|OY969554.1| 174324 g158822 i0 100 0.107806691449814 29 0 11 0 183 211 822741 822713 MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium
26765951 26765951 PRJNA690592_S_NODE_116961_length_307_cov_2.700855_g115947_i0 PRJNA690592 116961 307 2.700855 8.29162485 Chlamydiota bacterium 2081524 Bacteria Bacteria 65.9 6.14e-10   NR MCH9632984.1 2081524 g115947 i0 40.7 2.20846905537459 86 51 84 0 25 282 627 712 MCH9632984.1 Leucine--tRNA ligase [Chlamydiota bacterium] diamond 678 65.9 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
27145322 27145322 PRJNA690592_S_NODE_54682_length_423_cov_1.380000_g53668_i0 PRJNA690592 54682 423 1.38 5.8374 Chlamydiales bacterium 2047757 Bacteria Bacteria 53.5 3.87e-5   NR MFT4552970.1 2047757 g53668 i0 31.9 0.801418439716312 113 66 80.1 2 343 5 154 255 MFT4552970.1 hypothetical protein [Chlamydiales bacterium] diamond 339 53.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27177044 27177044 PRJNA690592_S_NODE_104282_length_322_cov_1.694779_g103268_i0 PRJNA690592 104282 322 1.694779 5.45718838 Chlamydiia bacterium 2052156 Bacteria Bacteria 60.1 2.88e-8   NR MCB1136078.1 2052156 g103268 i0 52.8 0.493788819875776 53 25 49.4 0 161 319 131 183 MCB1136078.1 U-box domain-containing protein [Chlamydiia bacterium] diamond 159 60.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
27935433 27935433 PRJNA690592_S_NODE_41785_length_475_cov_2.136816_g40771_i0 PRJNA690592 41785 475 2.136816 10.149876 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 107 2.49e-24   NR HEV8051750.1 2052176 g40771 i0 36.8 2.90526315789474 152 89 96 1 467 12 9 153 HEV8051750.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Parachlamydiaceae bacterium] diamond 1380 107 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
28061599 28061599 PRJNA690592_S_NODE_7545_length_1021_cov_3.089662_g6905_i0 PRJNA690592 7545 1021 3.089662 31.54544902 Waddliaceae bacterium 2026802 Bacteria Bacteria 66.2 1.81e-9   NR MEX1012080.1 2026802 g6905 i0 39.7 0.18511263467189 63 38 18.5 0 653 841 14 76 MEX1012080.1 RING-H2 finger protein [Waddliaceae bacterium] diamond 189 66.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae   Waddliaceae bacterium
28156611 28156611 PRJNA690592_S_NODE_74445_length_370_cov_2.074074_g73431_i0 PRJNA690592 74445 370 2.074074 7.6740738 Chlamydiota bacterium 2081524 Bacteria Bacteria 85.5 1.02e-16   NR NNM43842.1 2081524 g73431 i0 45.8 1.56486486486486 96 49 77.8 1 2 289 270 362 NNM43842.1 metallophosphoesterase family protein [Chlamydiota bacterium] diamond 579 85.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28609800 28609800 PRJNA690592_S_NODE_78727_length_361_cov_2.590278_g77713_i0 PRJNA690592 78727 361 2.590278 9.35090358 PVC group 1783257 Bacteria Bacteria 74.7 5.44e-13   NR MEM1283563.1 2081524 g77713 i0 38.5 6.23268698060942 104 59 84.8 2 54 359 101 201 MEM1283563.1 zinc-binding dehydrogenase [Chlamydiota bacterium] diamond 2250 75.1 0.994673768308922 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28724643 28724643 PRJNA690592_S_NODE_135007_length_290_cov_1.036866_g133993_i0 PRJNA690592 135007 290 1.036866 3.0069114 Neochlamydia sp. EPS4 1478175 Bacteria Bacteria 43.1 0.0466   NR WP_044881554.1 1478175 g133993 i0 23.4 0.796551724137931 77 56 76.6 1 5 226 44 120 WP_044881554.1 F-box/WD repeat-containing protein [Neochlamydia sp. EPS4] diamond 231 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia sp. EPS4
28830628 28830628 PRJNA690592_S_NODE_14828_length_764_cov_2.926194_g13942_i0 PRJNA690592 14828 764 2.926194 22.35612216 Parachlamydia 83551 Bacteria Bacteria 210 2.38e-62   NR MFA6914840.1 2052178 g13942 i0 55.4 3.48298429319372 175 76 68.3 2 557 36 198 371 MFA6914840.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Parachlamydiales bacterium] diamond 2661 210 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
28882481 28882481 PRJNA690592_S_NODE_52568_length_430_cov_2.016807_g51554_i0 PRJNA690592 52568 430 2.016807 8.6722701 Chlamydiales bacterium 2047757 Bacteria Bacteria 47.4 0.00203   NR HSX13858.1 2047757 g51554 i0 50 1.13023255813953 44 20 30.7 1 211 80 104 145 HSX13858.1 ankyrin repeat domain-containing protein [Chlamydiales bacterium] diamond 486 47.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28913941 28913941 PRJNA690592_S_NODE_89868_length_342_cov_1.427509_g88854_i0 PRJNA690592 89868 342 1.427509 4.88208078 Candidatus Similichlamydia epinepheli 1903953 Bacteria Bacteria 49.7 1.07e-4   NR WP_108623902.1 1903953 g88854 i0 44.7 0.824561403508772 47 26 41.2 0 340 200 89 135 WP_108623902.1 50S ribosomal protein L16 [Candidatus Similichlamydia epinepheli] diamond 282 49.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Parilichlamydiaceae Candidatus Similichlamydia Candidatus Similichlamydia epinepheli
29671603 29671603 PRJNA690592_S_NODE_48950_length_443_cov_2.686486_g47936_i0 PRJNA690592 48950 443 2.686486 11.90113298 Chlamydiia bacterium 2052156 Bacteria Bacteria 68.6 6.44e-11   NR MCB1136078.1 2052156 g47936 i0 49.2 0.440180586907449 65 33 44 0 351 157 131 195 MCB1136078.1 U-box domain-containing protein [Chlamydiia bacterium] diamond 195 68.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
30493265 30493265 PRJNA690592_S_NODE_168853_length_262_cov_2.195767_g167839_i0 PRJNA690592 168853 262 2.195767 5.75290954 Chlamydiota bacterium 2081524 Bacteria Bacteria 84.7 5.63e-17   NR MEC7839496.1 2081524 g167839 i0 51.2 3.52671755725191 82 40 93.9 0 256 11 3 84 MEC7839496.1 folylpolyglutamate synthase/dihydrofolate synthase family protein [Chlamydiota bacterium] diamond 924 84.7 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30682636 30682636 PRJNA690592_S_NODE_36033_length_507_cov_339.882488_g35023_i0 PRJNA690592 36033 507 339.882488 1723.20421416 Chlamydiales bacterium 2047757 Bacteria Bacteria 111 1.26e-27   NR MCP5470420.1 2047757 g35023 i0 49.2 1.44378698224852 124 62 72.8 1 6 374 1 124 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 732 111 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30809263 30809263 PRJNA690592_S_NODE_93674_length_336_cov_1.737643_g92660_i0 PRJNA690592 93674 336 1.737643 5.83848048 Parachlamydiales bacterium 2052178 Bacteria Bacteria 56.2 1.95e-6   NR MFA6916082.1 2052178 g92660 i0 44.4 2.25 54 30 48.2 0 164 3 313 366 MFA6916082.1 ATP-binding cassette domain-containing protein [Parachlamydiales bacterium] diamond 756 56.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
31167840 31167840 PRJNA690592_S_NODE_62075_length_400_cov_1.859327_g61061_i0 PRJNA690592 62075 400 1.859327 7.437308 root 1 Root_unresolved Root_unresolved 83.6 1.8e-16   NR WP_013181438.1 71667 g61061 i0 39.8 6.015 133 76 98.3 4 400 8 108 238 WP_013181438.1 orotidine-5'-phosphate decarboxylase [Waddlia chondrophila] diamond 2406 84.3 0.991696322657177 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
31789105 31789105 PRJNA690592_S_NODE_84897_length_350_cov_1.624549_g83883_i0 PRJNA690592 84897 350 1.624549 5.6859215 Chlamydiales bacterium 2047757 Bacteria Bacteria 120 6.77e-32   NR MCP5470421.1 2047757 g83883 i0 50.9 1.96285714285714 114 56 97.7 0 350 9 22 135 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 687 120 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31820695 31820695 PRJNA690592_S_NODE_143177_length_282_cov_3.995215_g142163_i0 PRJNA690592 143177 282 3.995215 11.2665063 Candidatus Anoxychlamydiales bacterium 2705072 Bacteria Bacteria 67 1.46e-10   NR NGX28848.1 2705072 g142163 i0 39.7 5.56382978723404 73 43 77.7 1 251 33 292 363 NGX28848.1 Sulfite reductase [NADPH] flavoprotein alpha-component [Candidatus Anoxychlamydiales bacterium] diamond 1569 67 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Candidatus Anoxychlamydiales     Candidatus Anoxychlamydiales bacterium
31978971 31978971 PRJNA690592_S_NODE_166518_length_264_cov_1.575916_g165504_i0 PRJNA690592 166518 264 1.575916 4.16041824 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 75.1 4.35e-14   NR HEY5236188.1 2047756 g165504 i0 40.2 0.988636363636364 87 51 97.7 1 263 6 73 159 HEY5236188.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 261 75.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
32010721 32010721 PRJNA690592_S_NODE_163658_length_266_cov_1.626943_g162644_i0 PRJNA690592 163658 266 1.626943 4.32766838 Chlamydiota bacterium 2081524 Bacteria Bacteria 47 0.00149   NR MEL7432199.1 2081524 g162644 i0 38.6 0.789473684210526 70 40 78.9 3 17 226 237 303 MEL7432199.1 alpha/beta hydrolase [Chlamydiota bacterium] diamond 210 47 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32200615 32200615 PRJNA690592_S_NODE_191678_length_249_cov_1.170455_g190664_i0 PRJNA690592 191678 249 1.170455 2.91443295 Candidatus Neptunochlamydia vexilliferae 1651774 Bacteria Bacteria 63.2 2.59e-9   NR WP_194847949.1 1651774 g190664 i0 34 1.13253012048193 94 48 96.4 1 240 1 365 458 WP_194847949.1 methyltransferase [Candidatus Neptunochlamydia vexilliferae] diamond 282 63.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia vexilliferae
32496925 32496925 PRJNA690592_S_NODE_59919_length_406_cov_2.525526_g58905_i0 PRJNA690592 59919 406 2.525526 10.25363556 Chlamydiia 204429 Bacteria Bacteria 88.2 2.07e-18   NR WP_194847851.1 1651774 g58905 i0 37.6 3.1551724137931 109 66 80.5 1 404 78 105 211 WP_194847851.1 dual specificity protein phosphatase family protein [Candidatus Neptunochlamydia vexilliferae] diamond 1281 88.6 0.99548532731377 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia vexilliferae
32528573 32528573 PRJNA690592_S_NODE_122419_length_302_cov_1.109170_g121405_i0 PRJNA690592 122419 302 1.10917 3.3496934 root 1 Root_unresolved Root_unresolved 43.5 0.0369   NR WP_098037718.1 483423 g121405 i0 61.3 0.615894039735099 31 12 30.8 0 164 72 273 303 WP_098037718.1 type I glyceraldehyde-3-phosphate dehydrogenase [Estrella lausannensis] diamond 186 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Estrella Estrella lausannensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;