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contig_metadata

10 rows where bioproject = "PRJNA690592", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 10 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 10 ✖

bioproject 1

  • PRJNA690592 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672132 672132 PRJNA690592_S_NODE_93201_length_337_cov_1.242424_g92187_i0 PRJNA690592 93201 337 1.242424 4.18696888 Methanobacterium sp. BRmetb2 2025350 Archaea Archaea 54.7 0.009   NTclustered gi|1473087786|gb|CP022705.1| 2025350 g92187 i0 100 0.086053412462908 29 0 9 0 224 252 194685 194657 MAG: Methanobacterium sp. BRmetb2 chromosome, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. BRmetb2
8325228 8325228 PRJNA690592_S_NODE_93387_length_337_cov_0.871212_g92373_i0 PRJNA690592 93387 337 0.871212 2.93598444 Methanothermobacter sp. EMTCatA1 2017966 Archaea Archaea 56.5 0.002   NTclustered gi|1214917725|dbj|AP018336.1| 2017966 g92373 i0 97.059 0.100890207715134 34 0 10 1 22 55 437476 437508 Methanothermobacter sp. EMTCatA1 DNA, complete genome blastn 34 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp. EMTCatA1
26639302 26639302 PRJNA690592_S_NODE_213461_length_242_cov_0.869822_g212447_i0 PRJNA690592 213461 242 0.869822 2.10496924 Methanocaldococcus villosus 667126 Archaea Archaea 47.8 2.45e-4   NR WP_004592618.1 667126 g212447 i0 38.4 0.90495867768595 73 28 90.5 2 242 24 85 140 WP_004592618.1 30S ribosomal protein S19e [Methanocaldococcus villosus] diamond 219 47.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus
27272052 27272052 PRJNA690592_S_NODE_108523_length_317_cov_1.262295_g107509_i0 PRJNA690592 108523 317 1.262295 4.00147515 Methanobacterium ferruginis 710191 Archaea Archaea 57.8 4.83e-7   NR WP_286242579.1 710191 g107509 i0 37.3 1.86435331230284 102 59 96.5 2 310 5 831 927 WP_286242579.1 Ig-like domain-containing protein [Methanobacterium ferruginis] diamond 591 57.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium ferruginis
27272088 27272088 PRJNA690592_S_NODE_155063_length_273_cov_1.155000_g154049_i0 PRJNA690592 155063 273 1.155 3.15315 Methanococcaceae archaeon 2528253 Archaea Archaea 76.3 8.69e-14   NR HID47562.1 2528253 g154049 i0 45.1 1 91 37 100 2 1 273 97 174 HID47562.1 ribosome biogenesis/translation initiation ATPase RLI [Methanococcaceae archaeon] diamond 273 76.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae   Methanococcaceae archaeon
27272151 27272151 PRJNA690592_S_NODE_206323_length_244_cov_0.935673_g205309_i0 PRJNA690592 206323 244 0.935673 2.28304212 Methanothermobacter sp. 1884223 Archaea Archaea 73.6 5.29e-13   NR MDI9623597.1 1884223 g205309 i0 49.4 0.971311475409836 79 39 95.9 1 2 235 60 138 MDI9623597.1 MEDS domain-containing protein [Methanothermobacter sp.] diamond 237 73.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter sp.
27682987 27682987 PRJNA690592_S_NODE_116764_length_308_cov_0.982979_g115750_i0 PRJNA690592 116764 308 0.982979 3.02757532 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 51.2 8.76e-5   NR WP_298501046.1 253161 g115750 i0 36.7 0.769480519480519 79 49 76 1 293 60 182 260 WP_298501046.1 C1 family peptidase [uncultured Methanobrevibacter sp.] diamond 237 51.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30746069 30746069 PRJNA690592_S_NODE_754_length_2261_cov_10.603291_g580_i0 PRJNA690592 754 2261 10.603291 239.74040951 Methanosphaera sp. 2666342 Archaea Archaea 150 2.4e-34   NR HIH35789.1 2666342 g580 i0 36.5 0.761609907120743 285 152 37.7 6 1149 298 260 516 HIH35789.1 IGHMBP2 family helicase [Methanosphaera sp.] diamond 1722 150 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.
31599637 31599637 PRJNA690592_S_NODE_195236_length_248_cov_0.880000_g194222_i0 PRJNA690592 195236 248 0.88 2.1824 Methanobrevibacter sp. 66852 Archaea Archaea 49.3 2.02e-4   NR WP_292795954.1 66852 g194222 i0 36.4 0.931451612903226 77 46 93.1 1 13 243 144 217 WP_292795954.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 231 49.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31642363 31642363 PRJNA690592_S_NODE_38176_length_495_cov_1.459716_g37165_i0 PRJNA690592 38176 495 1.459716 7.2255942 Methanocaldococcus 196118 Archaea Archaea 189 2.9799999999999998e-52   NR WP_013099461.1 67760 g37165 i0 57.6 6.84848484848485 158 65 94.5 1 2 469 519 676 WP_013099461.1 CDC48 family AAA ATPase [Methanocaldococcus infernus] diamond 3390 189 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus infernus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;