RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA690592", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA690592 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9600601 9600601 PRJNA690592_S_NODE_99928_length_328_cov_0.905882_g98914_i0 PRJNA690592 99928 328 0.905882 2.97129296 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 52.8 0.031   NTclustered gi|2874253743|emb|OY969586.1| 2052149 g98914 i0 100 0.0853658536585366 28 0 9 0 73 100 506955 506982 MAG: Candidatus Aminicenantes bacterium isolate MFD10007.bin.c.2 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
28187643 28187643 PRJNA690592_S_NODE_185066_length_251_cov_1.775281_g184052_i0 PRJNA690592 185066 251 1.775281 4.45595531 Candidatus Aminicenantaceae bacterium 3104267 Bacteria Bacteria 83.2 2.13e-16   NR MFA9453161.1 3104267 g184052 i0 48.8 3.82470119521912 80 41 95.6 0 3 242 383 462 MFA9453161.1 ATP-dependent protease ATPase subunit HslU [Candidatus Aminicenantaceae bacterium] diamond 960 83.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales Candidatus Aminicenantaceae   Candidatus Aminicenantaceae bacterium
29482161 29482161 PRJNA690592_S_NODE_208830_length_243_cov_1.335294_g207816_i0 PRJNA690592 208830 243 1.335294 3.24476442 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 86.3 1.73e-17   NR UCH93569.1 2052149 g207816 i0 56.3 0.987654320987654 80 33 98.8 1 3 242 286 363 UCH93569.1 MAG: response regulator [Candidatus Aminicenantes bacterium] diamond 240 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30240536 30240536 PRJNA690592_S_NODE_40412_length_482_cov_2.136919_g39398_i0 PRJNA690592 40412 482 2.136919 10.29994958 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 48.9 0.00159   NR MBS1226521.1 2052149 g39398 i0 26.8 0.697095435684647 112 67 69.7 2 135 470 37 133 MBS1226521.1 peptidoglycan L,D-transpeptidase lipoprotein, YkuD family [Candidatus Aminicenantes bacterium] diamond 336 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;