RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA690234" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA690234 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28503555 28503555 PRJNA690234_P_NODE_25287_length_253_cov_0.866667_g24920_i0 PRJNA690234 25287 253 0.866667 2.19266751 archaeon 1906665 Archaea Archaea 166 1.65e-50   NR RYG68742.1 1906665 g24920 i0 88 0.984189723320158 83 10 98.4 0 5 253 19 101 RYG68742.1 MAG: hypothetical protein EON64_04505 [archaeon] diamond 249 166 1 Archaea               archaeon
32548788 32548788 PRJNA690234_P_NODE_8239_length_447_cov_1.574866_g7873_i0 PRJNA690234 8239 447 1.574866 7.03965102 Nanobdellota archaeon 2026764 Archaea Archaea 50.8 4.12e-4   NR MEK6924946.1 2026764 g7873 i0 28.6 0.986577181208054 147 92 94.6 7 433 11 87 226 MEK6924946.1 pitrilysin family protein [Nanoarchaeota archaeon] diamond 441 50.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;