RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA690234", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 10 ✖

tax_kingdom 1

  • Fungi · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA690234 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5007192 5007192 PRJNA690234_P_NODE_32744_length_227_cov_4.811688_g32377_i0 PRJNA690234 32744 227 4.811688 10.92253176 Malassezia 55193 Fungi Fungi 420 4.81e-113   NTclustered gi|19908237|gb|AY083223.1| 55194 g32377 i0 100 100 227 0 100 0 1 227 811 1037 Malassezia furfur strain NCPF 3349 18S ribosomal RNA gene, partial sequence blastn 22700 420 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia furfur
9598525 9598525 PRJNA690234_P_NODE_15808_length_320_cov_1.028340_g15441_i0 PRJNA690234 15808 320 1.02834 3.290688 Psilocybe cubensis 181762 Fungi Fungi 58.4 6.45e-4   NTclustered gi|2234857607|ref|XM_047891812.1| 181762 g15441 i0 97.059 0.10625 34 1 11 0 103 136 749 782 Psilocybe cubensis U1 small nuclear ribonucleoprotein 70 kDa-like protein (JR316_0006063), partial mRNA blastn 34 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Strophariaceae Psilocybe Psilocybe cubensis
10874116 10874116 PRJNA690234_P_NODE_19289_length_288_cov_4.325581_g18922_i0 PRJNA690234 19289 288 4.325581 12.45767328 Malassezia japonica 223818 Fungi Fungi 438 1.7499999999999995e-118   NTclustered gi|1321659535|gb|KY911090.1| 223818 g18922 i0 94.118 66.5208333333333 289 16 100 1 1 288 4863 5151 Malassezia japonica mitochondrion, complete genome blastn 19158 438 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia japonica
13423811 13423811 PRJNA690234_P_NODE_14231_length_336_cov_2.593156_g13864_i0 PRJNA690234 14231 336 2.593156 8.71300416 Malassezia restricta 76775 Fungi Fungi 455 2.0700000000000003e-123   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g13864 i0 91.892 89.0148809523809 333 16 99 7 4 336 3299 2978 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 29909 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
14698830 14698830 PRJNA690234_P_NODE_11172_length_380_cov_3.957655_g10806_i0 PRJNA690234 11172 380 3.957655 15.039089 Malassezia restricta 76775 Fungi Fungi 699 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g10806 i0 100 103.226315789474 378 0 99 0 3 380 1846 1469 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 39226 699 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
19797251 19797251 PRJNA690234_P_NODE_29576_length_245_cov_1.709302_g29209_i0 PRJNA690234 29576 245 1.709302 4.1877899 Kondoa malvinella 36055 Fungi Fungi 342 1.17e-89   NTclustered gi|1393510851|ref|NG_057733.1| 36055 g29209 i0 100 145.134693877551 185 0 76 0 61 245 1441 1257 Kondoa malvinella CBS 6082 28S rRNA gene, partial sequence; from TYPE material blastn 35558 342 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Kondoaceae Kondoa Kondoa malvinella
23623168 23623168 PRJNA690234_P_NODE_29999_length_245_cov_0.906977_g29632_i0 PRJNA690234 29999 245 0.906977 2.22209365 Leucosporidium sp. AY30 662878 Fungi Fungi 364 2.5e-96   NTclustered gi|254927417|gb|GQ336996.1| 662878 g29632 i0 93.469 78.0938775510204 245 16 100 0 1 245 5473 5717 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 19133 364 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
24130784 24130784 PRJNA690234_P_NODE_7759_length_461_cov_4.569588_g7393_i0 PRJNA690234 7759 461 4.569588 21.06580068 Basidiomycota 5204 Fungi Fungi 728 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g7393 i0 95.228 106.101952277657 461 21 100 1 1 461 1918 1459 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 48913 728 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
31642325 31642325 PRJNA690234_P_NODE_3096_length_748_cov_2.681481_g2759_i0 PRJNA690234 3096 748 2.681481 20.05747788 Fungi 4751 Fungi Fungi 98.6 2.13e-19   NR KDE07049.1 683840 g2759 i0 36.7 1.8168449197861 147 85 56.1 3 424 5 522 667 KDE07049.1 hypothetical protein MVLG_02625 [Microbotryum lychnidis-dioicae p1A1 Lamole] diamond 1359 98.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Microbotryales Microbotryaceae Microbotryum Microbotryum lychnidis-dioicae
32243924 32243924 PRJNA690234_P_NODE_24838_length_254_cov_1.149171_g24471_i0 PRJNA690234 24838 254 1.149171 2.91889434 Eukaryota 2759 Fungi Fungi 74.3 3.17e-13   NR KZO91950.1 1330018 g24471 i0 43.7 3.07086614173228 87 44 96.9 2 3 248 108 194 KZO91950.1 P-loop containing nucleoside triphosphate hydrolase protein [Calocera viscosa TUFC12733] diamond 780 74.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Dacrymycetes Dacrymycetales Dacrymycetaceae Calocera Calocera viscosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;