RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA690234", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA690234 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2454147 2454147 PRJNA690234_P_NODE_8822_length_431_cov_2.824022_g8456_i0 PRJNA690234 8822 431 2.824022 12.17153482 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.012   NTclustered gi|817746583|ref|XM_012482823.1| 5857 g8456 i0 100 0.134570765661253 29 0 7 0 402 430 1241 1213 Plasmodium fragile uncharacterized protein (AK88_05221), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
4498558 4498558 PRJNA690234_P_NODE_9264_length_420_cov_1.853026_g8898_i0 PRJNA690234 9264 420 1.853026 7.7827092 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 54.3 2.1e-5   NR XP_726170.3 5861 g8898 i0 38.9 2.42857142857143 90 52 64.3 2 276 7 194 280 XP_726170.3 uncharacterized protein PY17X_1233000 [Plasmodium yoelii] diamond 1020 54.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
19797318 19797318 PRJNA690234_P_NODE_32716_length_228_cov_2.012903_g32349_i0 PRJNA690234 32716 228 2.012903 4.5894188400000004 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 80.5 9.32e-11   NTclustered gi|833025125|gb|KP642067.1| 83540 g32349 i0 94.231 2.02631578947368 52 3 23 0 158 209 1846 1795 Cryptosporidium felis isolate SC142 heat shock protein 70 (HSP70) gene, partial cds blastn 462 80.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
26797557 26797557 PRJNA690234_P_NODE_6141_length_522_cov_4.730512_g5777_i0 PRJNA690234 6141 522 4.730512 24.69327264 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 48.1 0.00781   NR XP_028526562.1 5849 g5777 i0 25.9 1.32758620689655 147 85 82.2 4 55 483 233 359 XP_028526562.1 conserved Plasmodium protein, unknown function [Plasmodium gallinaceum] diamond 693 48.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
31630947 31630947 PRJNA690234_P_NODE_16956_length_308_cov_2.612766_g16589_i0 PRJNA690234 16956 308 2.612766 8.04731928 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0151   NR XP_022810716.2 5861 g16589 i0 33.3 0.672077922077922 69 44 65.3 1 220 20 166 234 XP_022810716.2 PIR protein [Plasmodium yoelii] diamond 207 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
31642324 31642324 PRJNA690234_P_NODE_29736_length_245_cov_0.906977_g29369_i0 PRJNA690234 29736 245 0.906977 2.22209365 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 83.2 3.87e-17   NR XP_029219302.1 94643 g29369 i0 48.8 1.95918367346939 80 41 98 0 2 241 93 172 XP_029219302.1 putative adenylate kinase [Besnoitia besnoiti] diamond 480 83.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31800400 31800400 PRJNA690234_P_NODE_27537_length_249_cov_0.886364_g27170_i0 PRJNA690234 27537 249 0.886364 2.20704636 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 158 6.079999999999999e-46   NR XP_013247798.1 5801 g27170 i0 95.2 4 83 4 100 0 249 1 195 277 XP_013247798.1 fibrillarin, putative [Eimeria acervulina] diamond 996 159 0.993710691823899 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;