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contig_metadata

12 rows where bioproject = "PRJNA690234" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA690234 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1946068 1946068 PRJNA690234_P_NODE_15942_length_318_cov_1.812245_g15575_i0 PRJNA690234 15942 318 1.812245 5.7629391 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 292 1.61e-74   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g15575 i0 83.533 75.4245283018868 334 33 100 19 1 318 5878 6205 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 23985 292 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
5773812 5773812 PRJNA690234_P_NODE_26345_length_251_cov_0.876404_g25978_i0 PRJNA690234 26345 251 0.876404 2.19977404 uncultured kinetoplastid 204529 Euglenozoa other_Eukaryota 424 4.18e-114   NTclustered gi|363903324|gb|JN542574.1| 204529 g25978 i0 97.211 98.9521912350598 251 6 100 1 1 251 1148 1397 Uncultured kinetoplastid clone Kryos_IF_C10 18S ribosomal RNA gene, partial sequence blastn 24837 424 1 Eukaryota Discoba   Euglenozoa Kinetoplastea       uncultured kinetoplastid
9598980 9598980 PRJNA690234_P_NODE_7208_length_479_cov_2.443350_g6842_i0 PRJNA690234 7208 479 2.44335 11.7036465 root 1 Root_unresolved Root_unresolved 168 7.259999999999999e-45   NR XP_044549878.1 51637 g6842 i0 58.7 29.098121085595 138 50 82 2 3 395 780 917 XP_044549878.1 uncharacterized protein C9374_003034 [Naegleria lovaniensis] diamond 13938 169 0.994082840236686 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
17248307 17248307 PRJNA690234_P_NODE_4214_length_640_cov_1.238095_g3858_i0 PRJNA690234 4214 640 1.238095 7.923808 Andalucia godoyi 505711 Root_unresolved Root_unresolved 216 1.57e-63   NR WCZ58460.1 505711 g3858 i0 49.1 2.04375 216 107 99.8 2 1 639 6 221 WCZ58460.1 phenylalanyl-tRNA synthetase beta subunit [Andalucia godoyi] diamond 1308 216 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
19797417 19797417 PRJNA690234_P_NODE_7776_length_461_cov_1.695876_g7410_i0 PRJNA690234 7776 461 1.695876 7.81798836 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 193 2.53e-44   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g7410 i0 93.75 26.590021691974 128 8 28 0 239 366 3852 3979 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12258 193 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
21581002 21581002 PRJNA690234_P_NODE_13017_length_351_cov_2.683453_g12650_i0 PRJNA690234 13017 351 2.683453 9.41892003 Vahlkampfia 5770 Heterolobosea other_Eukaryota 649 0   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g12650 i0 100 85.7407407407407 351 0 100 0 1 351 362 712 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 30095 649 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
22347515 22347515 PRJNA690234_P_NODE_22818_length_266_cov_1.202073_g22451_i0 PRJNA690234 22818 266 1.202073 3.19751418 Allovahlkampfia sp. PKD 2011a 1217110 Heterolobosea other_Eukaryota 486 5.629999999999999e-133   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g22451 i0 99.624 46.0037593984962 266 1 100 0 1 266 277 12 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 12237 486 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
23622771 23622771 PRJNA690234_P_NODE_13179_length_349_cov_1.978261_g12812_i0 PRJNA690234 13179 349 1.978261 6.90413089 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 645 1.1899999999999993e-180   NTclustered gi|2283788571|gb|OP179657.1| 74082 g12812 i0 100 92.6676217765043 349 0 100 0 1 349 918 1266 Vahlkampfia avara isolate VA7 small subunit ribosomal RNA gene, partial sequence blastn 32341 645 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
26955678 26955678 PRJNA690234_P_NODE_17582_length_303_cov_1.013043_g17215_i0 PRJNA690234 17582 303 1.013043 3.06952029 Acrasis kona 1008807 Heterolobosea other_Eukaryota 50.8 1.08e-4   NR KAL0483290.1 1008807 g17215 i0 28.4 0.940594059405941 95 67 93.1 1 6 287 68 162 KAL0483290.1 transportin protein TNPO1 [Acrasis kona] diamond 285 50.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28293861 28293861 PRJNA690234_P_NODE_17166_length_306_cov_2.326180_g16799_i0 PRJNA690234 17166 306 2.32618 7.1181108 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.7 2.74e-4   NR XP_002675654.1 5762 g16799 i0 43.4 3.27450980392157 53 30 52 0 224 66 450 502 XP_002675654.1 uncharacterized protein NAEGRDRAFT_80282 [Naegleria gruberi] diamond 1002 50.1 0.992015968063872 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30347147 30347147 PRJNA690234_P_NODE_15232_length_325_cov_2.178571_g14865_i0 PRJNA690234 15232 325 2.178571 7.08035575 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.6 2.93e-20   NR KAG8339691.1 5699 g14865 i0 41 4.61538461538461 100 59 92.3 0 322 23 214 313 KAG8339691.1 putative GDP-L-fucose synthetase [Trypanosoma vivax] diamond 1500 94.4 0.991525423728813 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
31030494 31030494 PRJNA690234_P_NODE_13395_length_346_cov_1.827839_g13028_i0 PRJNA690234 13395 346 1.827839 6.32432294 Acrasis kona 1008807 Heterolobosea other_Eukaryota 72 7.8e-13   NR KAL0490624.1 1008807 g13028 i0 39.1 3.39884393063584 92 50 78 2 298 29 6 93 KAL0490624.1 DR1 [Acrasis kona] diamond 1176 72 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;