RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA690124", tax_phylum = "Uroviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690124 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29292840 29292840 PRJNA690124_P_NODE_54689_length_243_cov_0.917647_g54323_i0 PRJNA690124 54689 243 0.917647 2.22988221 Rhodococcus phage Jflix2 3049372 Viruses Viruses 93.6 4.98e-20   NR WIF20512.1 3049372 g54323 i0 61.3 0.987654320987654 80 31 98.8 0 240 1 19 98 WIF20512.1 minor tail protein [Rhodococcus phage Jflix2] diamond 240 93.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Rhodococcus phage Jflix2
30019370 30019370 PRJNA690124_P_NODE_53391_length_244_cov_0.912281_g53025_i0 PRJNA690124 53391 244 0.912281 2.22596564 Caudoviricetes sp. 2832643 Viruses Viruses 42.7 0.0318   NR DAS86913.1 2832643 g53025 i0 46.3 0.663934426229508 54 29 66.4 0 26 187 166 219 DAS86913.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 162 42.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31599524 31599524 PRJNA690124_P_NODE_43836_length_253_cov_0.866667_g43470_i0 PRJNA690124 43836 253 0.866667 2.19266751 uncultured Caudovirales phage 2100421 Viruses Viruses 163 4e-47   NR CAB4159664.1 2100421 g43470 i0 98.8 0.99604743083004 84 1 99.6 0 252 1 79 162 CAB4159664.1 hypothetical protein UFOVP715_71 [uncultured Caudovirales phage] diamond 252 163 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;