RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA690124", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Negarnaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690124 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29198312 29198312 PRJNA690124_P_NODE_3829_length_802_cov_1.341564_g3518_i0 PRJNA690124 3829 802 1.341564 10.75934328 Zebrafish influenza-like virus RQ12 Viruses Viruses 137 2.39e-35   NR QOE76807.1 RQ12 g3518 i0 41 0.703241895261845 188 109 70 2 3 563 68 254 QOE76807.1 matrix protein [Siamese algae-eater influenza-like virus] diamond 564 137 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
29387738 29387738 PRJNA690124_P_NODE_20269_length_361_cov_1.222222_g19903_i0 PRJNA690124 20269 361 1.222222 4.41222142 Zebrafish influenza-like virus RQ12 Viruses Viruses 133 9.689999999999999e-34   NR QOE76806.1 RQ12 g19903 i0 58.5 1.02216066481994 123 44 99.7 3 361 2 275 393 QOE76806.1 hemagglutinin [Siamese algae-eater influenza-like virus] diamond 369 133 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
29829571 29829571 PRJNA690124_P_NODE_15411_length_411_cov_1.834320_g15045_i0 PRJNA690124 15411 411 1.83432 7.5390552 Zebrafish influenza-like virus RQ12 Viruses Viruses 107 5.91e-24   NR QOE76804.1 RQ12 g15045 i0 38.5 0.985401459854015 135 82 98.5 1 5 409 404 537 QOE76804.1 nucleoprotein [Siamese algae-eater influenza-like virus] diamond 405 107 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
31536315 31536315 PRJNA690124_P_NODE_34936_length_281_cov_1.495192_g34570_i0 PRJNA690124 34936 281 1.495192 4.20148952 Zebrafish influenza-like virus RQ12 Viruses Viruses 78.2 2e-14   NR QOE76806.1 RQ12 g34570 i0 37.6 0.99288256227758 93 58 99.3 0 2 280 47 139 QOE76806.1 hemagglutinin [Siamese algae-eater influenza-like virus] diamond 279 78.2 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
31630924 31630924 PRJNA690124_P_NODE_37976_length_270_cov_1.187817_g37610_i0 PRJNA690124 37976 270 1.187817 3.2071059 Zebrafish influenza-like virus RQ12 Viruses Viruses 78.6 1.29e-14   NR QOE76804.1 RQ12 g37610 i0 55.9 0.755555555555556 68 30 75.6 0 249 46 55 122 QOE76804.1 nucleoprotein [Siamese algae-eater influenza-like virus] diamond 204 78.6 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus
32548758 32548758 PRJNA690124_P_NODE_35319_length_280_cov_0.956522_g34953_i0 PRJNA690124 35319 280 0.956522 2.6782616 Zebrafish influenza-like virus RQ12 Viruses Viruses 91.3 4.83e-19   NR QOE76804.1 RQ12 g34953 i0 48.9 0.964285714285714 90 46 96.4 0 280 11 317 406 QOE76804.1 nucleoprotein [Siamese algae-eater influenza-like virus] diamond 270 91.3 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza-like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;