contig_metadata
11 rows where bioproject = "PRJNA690124", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 669279 | 669279 | PRJNA690124_P_NODE_34001_length_285_cov_1.103774_g33635_i0 | PRJNA690124 | 34001 | 285 | 1.103774 | 3.1457559 | Capillovirus mali | 28347 | Viruses | Viruses | 427 | 3.74e-115 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g33635 | i0 | 93.972 | 1.97894736842105 | 282 | 17 | 99 | 0 | 4 | 285 | 1734 | 1453 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 564 | 427 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 669780 | 669780 | PRJNA690124_P_NODE_55701_length_242_cov_0.923077_g55335_i0 | PRJNA690124 | 55701 | 242 | 0.923077 | 2.23384634 | Capillovirus mali | 28347 | Viruses | Viruses | 364 | 2.4699999999999992e-96 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g55335 | i0 | 93.802 | 2 | 242 | 15 | 100 | 0 | 1 | 242 | 1467 | 1226 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 484 | 364 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 1945755 | 1945755 | PRJNA690124_P_NODE_52442_length_245_cov_0.906977_g52076_i0 | PRJNA690124 | 52442 | 245 | 0.906977 | 2.22209365 | Foveavirus mali | 35350 | Viruses | Viruses | 283 | 7.2e-72 | NTclustered | gi|1229033421|gb|KY081217.1| | 35350 | g52076 | i0 | 93.651 | 9.60816326530612 | 189 | 12 | 77 | 0 | 57 | 245 | 1 | 189 | Foveavirus mali isolate YSH2 coat protein gene, complete cds | blastn | 2354 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 10872938 | 10872938 | PRJNA690124_P_NODE_15649_length_408_cov_1.994030_g15283_i0 | PRJNA690124 | 15649 | 408 | 1.99403 | 8.1356424 | Capillovirus mali | 28347 | Viruses | Viruses | 682 | 0 | NTclustered | gi|1824676484|gb|MK481972.1| | 28347 | g15283 | i0 | 96.814 | 43.9950980392157 | 408 | 13 | 100 | 0 | 1 | 408 | 3712 | 3305 | Apple stem grooving virus isolate Tibet-4, complete genome | blastn | 17950 | 682 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 12148747 | 12148747 | PRJNA690124_P_NODE_42130_length_256_cov_0.945355_g41764_i0 | PRJNA690124 | 42130 | 256 | 0.945355 | 2.4201088 | Foveavirus mali | 35350 | Viruses | Viruses | 433 | 7.11e-117 | NTclustered | gi|526132482|gb|JX673872.1| | 35350 | g41764 | i0 | 97.255 | 7.921875 | 255 | 7 | 99 | 0 | 2 | 256 | 514 | 768 | Apple stem pitting virus clone HN-HM-20 TGB1, TGB2, and TGB3 genes, complete cds | blastn | 2028 | 433 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 12148966 | 12148966 | PRJNA690124_P_NODE_52450_length_245_cov_0.906977_g52084_i0 | PRJNA690124 | 52450 | 245 | 0.906977 | 2.22209365 | Trichovirus mali | 12175 | Viruses | Viruses | 276 | 1.21e-69 | NTclustered | gi|1810787445|gb|MK368730.1| | 12175 | g52084 | i0 | 87.045 | 5.96326530612245 | 247 | 28 | 100 | 4 | 1 | 245 | 2850 | 3094 | Apple chlorotic leaf spot virus isolate Shanxi_1, complete genome | blastn | 1461 | 276 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Trichovirus | Trichovirus mali | ||
| 13422909 | 13422909 | PRJNA690124_P_NODE_22911_length_341_cov_1.291045_g22545_i0 | PRJNA690124 | 22911 | 341 | 1.291045 | 4.40246345 | Capillovirus mali | 28347 | Viruses | Viruses | 558 | 1.56e-154 | NTclustered | gi|2219859828|gb|OM313335.1| | 28347 | g22545 | i0 | 96.188 | 100.105571847507 | 341 | 13 | 100 | 0 | 1 | 341 | 353 | 13 | Apple stem grooving virus isolate SD-Pb312-8S coat protein gene, complete cds | blastn | 34136 | 558 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 13423510 | 13423510 | PRJNA690124_P_NODE_50431_length_247_cov_0.896552_g50065_i0 | PRJNA690124 | 50431 | 247 | 0.896552 | 2.21448344 | Foveavirus mali | 35350 | Viruses | Viruses | 416 | 6.869999999999999e-112 | NTclustered | gi|526132506|gb|JX673878.1| | 35350 | g50065 | i0 | 99.134 | 39.9716599190283 | 231 | 2 | 94 | 0 | 17 | 247 | 1026 | 796 | Apple stem pitting virus clone LN-AP1-1 TGB1, TGB2, and TGB3 genes, complete cds | blastn | 9873 | 416 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 17247674 | 17247674 | PRJNA690124_P_NODE_56074_length_242_cov_0.923077_g55708_i0 | PRJNA690124 | 56074 | 242 | 0.923077 | 2.23384634 | Foveavirus mali | 35350 | Viruses | Viruses | 431 | 2.4e-116 | NTclustered | gi|2111969293|gb|MZ148040.1| | 35350 | g55708 | i0 | 98.76 | 8.70661157024793 | 242 | 3 | 100 | 0 | 1 | 242 | 5316 | 5075 | Foveavirus mali isolate 13TF175D, complete genome | blastn | 2107 | 431 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 21071803 | 21071803 | PRJNA690124_P_NODE_37937_length_270_cov_1.335025_g37571_i0 | PRJNA690124 | 37937 | 270 | 1.335025 | 3.6045675 | Foveavirus mali | 35350 | Viruses | Viruses | 438 | 1.6299999999999993e-118 | NTclustered | gi|285804505|gb|FJ970954.1| | 35350 | g37571 | i0 | 95.926 | 99.5666666666667 | 270 | 11 | 100 | 0 | 1 | 270 | 623 | 354 | Apple stem pitting virus isolate 402ASP coat protein gene, partial cds | blastn | 26883 | 438 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 23622077 | 23622077 | PRJNA690124_P_NODE_32039_length_292_cov_2.429224_g31673_i0 | PRJNA690124 | 32039 | 292 | 2.429224 | 7.09333408 | Capillovirus mali | 28347 | Viruses | Viruses | 477 | 3.77e-130 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g31673 | i0 | 96.233 | 8.9486301369863 | 292 | 10 | 100 | 1 | 1 | 292 | 2921 | 3211 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 2613 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;