RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA690124" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30430316 30430316 PRJNA690124_P_NODE_55373_length_242_cov_1.502959_g55007_i0 PRJNA690124 55373 242 1.502959 3.63716078 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 166 8.43e-49   NR MCE2755666.1 2026749 g55007 i0 93.8 0.991735537190083 80 5 99.2 0 240 1 47 126 MCE2755666.1 DHH family phosphoesterase [Ignavibacteriota bacterium] diamond 240 166 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
31219480 31219480 PRJNA690124_P_NODE_35255_length_280_cov_1.164251_g34889_i0 PRJNA690124 35255 280 1.164251 3.2599028 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 161 1.75e-47   NR MCE2755245.1 2026749 g34889 i0 97.5 1.69285714285714 79 2 84.6 0 237 1 1 79 MCE2755245.1 hypothetical protein [Ignavibacteriota bacterium] diamond 474 161 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;