RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA690124", tax_phylum = "Candidatus Aenigmatarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Aenigmatarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA690124 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29482037 29482037 PRJNA690124_P_NODE_49230_length_248_cov_0.891429_g48864_i0 PRJNA690124 49230 248 0.891429 2.21074392 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 57 3.7e-7   NR MEK6909714.1 3121606 g48864 i0 46.3 0.810483870967742 67 36 81 0 1 201 276 342 MEK6909714.1 thymidylate synthase [Candidatus Aenigmatarchaeota archaeon] diamond 201 57 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
32232363 32232363 PRJNA690124_P_NODE_46678_length_250_cov_0.881356_g46312_i0 PRJNA690124 46678 250 0.881356 2.20339 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 118 8.58e-29   NR MBI2005458.1 3121606 g46312 i0 71.3 6.828 80 23 96 0 2 241 442 521 MBI2005458.1 elongation factor EF-2 [Candidatus Aenigmatarchaeota archaeon] diamond 1707 118 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;