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contig_metadata

16 rows where bioproject = "PRJNA690124" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690124 · 16 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1945124 1945124 PRJNA690124_P_NODE_24942_length_329_cov_1.039062_g24576_i0 PRJNA690124 24942 329 1.039062 3.41851398 Metazoa 33208 Brachiopoda other_Eukaryota 187 3.94e-58   NR XP_013399282.1 7574 g24576 i0 78 8.91793313069909 109 24 99.4 0 2 328 33 141 XP_013399282.1 60S ribosomal protein L13a isoform X1 [Lingula anatina] diamond 2934 187 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
7047539 7047539 PRJNA690124_P_NODE_18266_length_379_cov_1.019608_g17900_i0 PRJNA690124 18266 379 1.019608 3.86431432 Lingula anatina 7574 Brachiopoda other_Eukaryota 192 2.1599999999999997e-56   NR XP_013381162.1 7574 g17900 i0 73.8 2.98416886543536 126 33 99.7 0 378 1 344 469 XP_013381162.1 serine hydroxymethyltransferase, cytosolic-like [Lingula anatina] diamond 1131 192 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
9598037 9598037 PRJNA690124_P_NODE_44688_length_252_cov_0.871508_g44322_i0 PRJNA690124 44688 252 0.871508 2.19620016 Metazoa 33208 Brachiopoda other_Eukaryota 127 9.459999999999999e-32   NR XP_013416027.1 7574 g44322 i0 63.4 165.952380952381 82 30 97.6 0 247 2 75 156 XP_013416027.1 pre-mRNA 3' end processing protein WDR33 [Lingula anatina] diamond 41820 128 0.9921875 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
13422738 13422738 PRJNA690124_P_NODE_13371_length_440_cov_1.416894_g13006_i0 PRJNA690124 13371 440 1.416894 6.2343336 Lingula anatina 7574 Brachiopoda other_Eukaryota 231 5.85e-75   NR XP_013399327.1 7574 g13006 i0 81.5 5.93181818181818 146 27 99.5 0 440 3 9 154 XP_013399327.1 40S ribosomal protein S7 [Lingula anatina] diamond 2610 231 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
21071570 21071570 PRJNA690124_P_NODE_27817_length_313_cov_1.083333_g27451_i0 PRJNA690124 27817 313 1.083333 3.39083229 Lingula anatina 7574 Brachiopoda other_Eukaryota 177 1.77e-53   NR XP_013395677.1 7574 g27451 i0 82.7 5.98083067092652 104 18 99.7 0 312 1 133 236 XP_013395677.1 60S ribosomal protein L7a [Lingula anatina] diamond 1872 177 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26987323 26987323 PRJNA690124_P_NODE_29122_length_306_cov_1.759657_g28756_i0 PRJNA690124 29122 306 1.759657 5.38455042 Lingula anatina 7574 Brachiopoda other_Eukaryota 150 1.86e-40   NR XP_013385149.1 7574 g28756 i0 70.3 1.98039215686275 101 30 99 0 305 3 128 228 XP_013385149.1 beta-hexosaminidase subunit alpha-like isoform X3 [Lingula anatina] diamond 606 150 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27820513 27820513 PRJNA690124_P_NODE_29224_length_306_cov_1.150215_g28858_i0 PRJNA690124 29224 306 1.150215 3.5196579 Metazoa 33208 Brachiopoda other_Eukaryota 81.6 4.02e-17   NR XP_013417324.1 7574 g28858 i0 72.1 3.56862745098039 61 17 59.8 0 124 306 4 64 XP_013417324.1 endothelial differentiation-related factor 1 [Lingula anatina] diamond 1092 81.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27946661 27946661 PRJNA690124_P_NODE_32805_length_290_cov_0.894009_g32439_i0 PRJNA690124 32805 290 0.894009 2.5926261 Metazoa 33208 Brachiopoda other_Eukaryota 120 2.09e-29   NR XP_013409543.1 7574 g32439 i0 62.8 9.65172413793104 94 35 97.2 0 7 288 49 142 XP_013409543.1 UDP-N-acetylhexosamine pyrophosphorylase isoform X6 [Lingula anatina] diamond 2799 120 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27978209 27978209 PRJNA690124_P_NODE_43485_length_253_cov_0.866667_g43119_i0 PRJNA690124 43485 253 0.866667 2.19266751 Metazoa 33208 Brachiopoda other_Eukaryota 87 2.76e-19   NR XP_013397869.1 7574 g43119 i0 47.7 4.06719367588933 86 43 99.6 1 253 2 80 165 XP_013397869.1 placenta-specific gene 8 protein [Lingula anatina] diamond 1029 87.8 0.990888382687927 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28282305 28282305 PRJNA690124_P_NODE_54826_length_243_cov_0.917647_g54460_i0 PRJNA690124 54826 243 0.917647 2.22988221 Lingula anatina 7574 Brachiopoda other_Eukaryota 78.2 1.25e-14   NR XP_023933258.1 7574 g54460 i0 47.5 3.95061728395062 80 41 98.8 1 2 241 5063 5141 XP_023933258.1 titin isoform X1 [Lingula anatina] diamond 960 78.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28314154 28314154 PRJNA690124_P_NODE_41566_length_257_cov_2.119565_g41200_i0 PRJNA690124 41566 257 2.119565 5.44728205 Lingula anatina 7574 Brachiopoda other_Eukaryota 84 1.41e-16   NR XP_013389170.1 7574 g41200 i0 49.3 1.75097276264591 75 37 87.5 1 6 230 1067 1140 XP_013389170.1 von Willebrand factor D and EGF domain-containing protein [Lingula anatina] diamond 450 84 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28850607 28850607 PRJNA690124_P_NODE_16868_length_394_cov_1.233645_g16502_i0 PRJNA690124 16868 394 1.233645 4.8605613 Lingula anatina 7574 Brachiopoda other_Eukaryota 216 1.3799999999999999e-67   NR XP_013399374.1 7574 g16502 i0 75.9 2.01776649746193 133 29 99 1 391 2 146 278 XP_013399374.1 regucalcin [Lingula anatina] diamond 795 216 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30473111 30473111 PRJNA690124_P_NODE_31193_length_296_cov_2.098655_g30827_i0 PRJNA690124 31193 296 2.098655 6.2120188 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.5 2.05e-6   NR XP_013396966.1 7574 g30827 i0 39.7 3.47635135135135 73 44 74 0 287 69 202 274 XP_013396966.1 60S acidic ribosomal protein P0-like [Lingula anatina] diamond 1029 55.5 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
30840715 30840715 PRJNA690124_P_NODE_45874_length_251_cov_0.876404_g45508_i0 PRJNA690124 45874 251 0.876404 2.19977404 Lingula anatina 7574 Brachiopoda other_Eukaryota 84.3 9.56e-17   NR XP_023932230.1 7574 g45508 i0 51.9 0.920318725099602 77 37 92 0 245 15 762 838 XP_023932230.1 poly [ADP-ribose] polymerase 14-like isoform X1 [Lingula anatina] diamond 231 84.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32465217 32465217 PRJNA690124_P_NODE_17859_length_383_cov_1.629032_g17493_i0 PRJNA690124 17859 383 1.629032 6.23919256 Metazoa 33208 Brachiopoda other_Eukaryota 70.1 2.08e-11   NR XP_013409579.1 7574 g17493 i0 50.9 0.947780678851175 55 27 43.1 0 381 217 128 182 XP_013409579.1 selenoprotein Pb-like [Lingula anatina] diamond 363 70.5 0.994326241134752 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32528561 32528561 PRJNA690124_P_NODE_25059_length_328_cov_1.219608_g24693_i0 PRJNA690124 25059 328 1.219608 4.00031424 Metazoa 33208 Brachiopoda other_Eukaryota 166 1.61e-46   NR XP_013394465.1 7574 g24693 i0 68.5 1.97560975609756 108 34 98.8 0 3 326 374 481 XP_013394465.1 lysosomal Pro-X carboxypeptidase-like [Lingula anatina] diamond 648 167 0.994011976047904 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;