contig_metadata
11 rows where bioproject = "PRJNA690124", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12148849 | 12148849 | PRJNA690124_P_NODE_46890_length_250_cov_0.881356_g46524_i0 | PRJNA690124 | 46890 | 250 | 0.881356 | 2.20339 | Nitrospirota | 40117 | Bacteria | Bacteria | 125 | 4.1499999999999986e-34 | NR | MBM4128633.1 | 70125 | g46524 | i0 | 79.3 | 2.952 | 82 | 12 | 98.4 | 1 | 248 | 3 | 76 | 152 | MBM4128633.1 D-alanine--D-alanine ligase [Nitrospira sp.] | diamond | 738 | 125 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 24895886 | 24895886 | PRJNA690124_P_NODE_51080_length_246_cov_0.901734_g50714_i0 | PRJNA690124 | 51080 | 246 | 0.901734 | 2.21826564 | Bacteria | 2 | Bacteria | Bacteria | 154 | 4.86e-44 | NR | OGX10387.1 | 1801718 | g50714 | i0 | 97.5 | 1.97560975609756 | 81 | 2 | 98.8 | 0 | 2 | 244 | 6 | 86 | OGX10387.1 MAG: ketol-acid reductoisomerase [Nitrospirae bacterium RIFCSPLOWO2_12_FULL_63_8] | diamond | 486 | 154 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirae bacterium RIFCSPLOWO2_12_FULL_63_8 | ||||||
| 26670586 | 26670586 | PRJNA690124_P_NODE_52601_length_245_cov_0.906977_g52235_i0 | PRJNA690124 | 52601 | 245 | 0.906977 | 2.22209365 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 169 | 8.199999999999999e-49 | NR | HET9395606.1 | 2026770 | g52235 | i0 | 100 | 3.96734693877551 | 81 | 0 | 99.2 | 0 | 245 | 3 | 284 | 364 | HET9395606.1 alpha-amylase family glycosyl hydrolase [Nitrospiraceae bacterium] | diamond | 972 | 169 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 28440510 | 28440510 | PRJNA690124_P_NODE_46026_length_251_cov_0.876404_g45660_i0 | PRJNA690124 | 46026 | 251 | 0.876404 | 2.19977404 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 85.9 | 2.67e-17 | NR | PHX90426.1 | 2026887 | g45660 | i0 | 93.6 | 0.561752988047809 | 47 | 3 | 56.2 | 0 | 3 | 143 | 584 | 630 | PHX90426.1 MAG: hypothetical protein CK534_05520 [Nitrospirota bacterium] | diamond | 141 | 85.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 30125208 | 30125208 | PRJNA690124_P_NODE_44852_length_252_cov_0.871508_g44486_i0 | PRJNA690124 | 44852 | 252 | 0.871508 | 2.19620016 | Dissulfurispira | 2811506 | Bacteria | Bacteria | 77 | 4.92e-16 | NR | MEW6410371.1 | 2026887 | g44486 | i0 | 48.1 | 1.85714285714286 | 79 | 41 | 94 | 0 | 239 | 3 | 5 | 83 | MEW6410371.1 nucleotidyltransferase domain-containing protein [Nitrospirota bacterium] | diamond | 468 | 77 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 30208482 | 30208482 | PRJNA690124_P_NODE_52452_length_245_cov_0.906977_g52086_i0 | PRJNA690124 | 52452 | 245 | 0.906977 | 2.22209365 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 167 | 4.35e-49 | NR | MBM4123376.1 | 70125 | g52086 | i0 | 95.1 | 0.991836734693878 | 81 | 4 | 99.2 | 0 | 245 | 3 | 170 | 250 | MBM4123376.1 FMN-binding protein [Nitrospira sp.] | diamond | 243 | 167 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 30682491 | 30682491 | PRJNA690124_P_NODE_52213_length_245_cov_0.906977_g51847_i0 | PRJNA690124 | 52213 | 245 | 0.906977 | 2.22209365 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 73.2 | 6.9e-13 | NR | MBI5666217.1 | 2026887 | g51847 | i0 | 52.9 | 0.857142857142857 | 70 | 30 | 83.3 | 2 | 243 | 40 | 146 | 214 | MBI5666217.1 DNA ligase [Nitrospirota bacterium] | diamond | 210 | 73.2 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31187884 | 31187884 | PRJNA690124_P_NODE_44195_length_252_cov_0.871508_g43829_i0 | PRJNA690124 | 44195 | 252 | 0.871508 | 2.19620016 | Nitrospirales bacterium | 2358460 | Bacteria | Bacteria | 85.9 | 1e-18 | NR | MDO8547866.1 | 2358460 | g43829 | i0 | 59.2 | 0.904761904761905 | 76 | 29 | 88.1 | 2 | 225 | 4 | 49 | 124 | MDO8547866.1 hypothetical protein [Nitrospirales bacterium] | diamond | 228 | 85.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospirales bacterium | ||||
| 31757520 | 31757520 | PRJNA690124_P_NODE_50337_length_247_cov_0.896552_g49971_i0 | PRJNA690124 | 50337 | 247 | 0.896552 | 2.21448344 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 83.6 | 1.62e-16 | NR | MEW5745900.1 | 2026887 | g49971 | i0 | 50 | 1.02024291497976 | 84 | 38 | 98.4 | 2 | 245 | 3 | 537 | 619 | MEW5745900.1 hypothetical protein [Nitrospirota bacterium] | diamond | 252 | 83.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 31820641 | 31820641 | PRJNA690124_P_NODE_48157_length_249_cov_0.886364_g47791_i0 | PRJNA690124 | 48157 | 249 | 0.886364 | 2.20704636 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 66.6 | 1.58e-10 | NR | MEO2054693.1 | 70125 | g47791 | i0 | 45 | 0.963855421686747 | 80 | 38 | 92.8 | 2 | 18 | 248 | 2891 | 2967 | MEO2054693.1 LPD38 domain-containing protein [Nitrospira sp.] | diamond | 240 | 66.6 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31947148 | 31947148 | PRJNA690124_P_NODE_44897_length_252_cov_0.871508_g44531_i0 | PRJNA690124 | 44897 | 252 | 0.871508 | 2.19620016 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 133 | 4.84e-34 | NR | HKC95882.1 | 70125 | g44531 | i0 | 85.5 | 0.988095238095238 | 83 | 12 | 98.8 | 0 | 251 | 3 | 378 | 460 | HKC95882.1 acyl-[ACP]--phospholipid O-acyltransferase [Nitrospira sp.] | diamond | 249 | 133 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;