RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA690124", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA690124 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7048308 7048308 PRJNA690124_P_NODE_52826_length_245_cov_0.906977_g52460_i0 PRJNA690124 52826 245 0.906977 2.22209365 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 143 6.23e-41   NR VDP94710.1 27848 g52460 i0 80.2 12 81 16 99.2 0 1 243 74 154 VDP94710.1 unnamed protein product [Echinostoma caproni] diamond 2940 143 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
18521320 18521320 PRJNA690124_P_NODE_33675_length_286_cov_1.380282_g33309_i0 PRJNA690124 33675 286 1.380282 3.94760652 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 172 1.94e-38   NTclustered gi|2318756696|ref|XM_051218432.1| 6185 g33309 i0 80.252 9.05594405594406 238 40 82 6 8 241 235 1 Schistosoma haematobium Ras- protein Rap-1b (RAP1B_2), partial mRNA blastn 2590 172 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
25404893 25404893 PRJNA690124_P_NODE_28320_length_310_cov_1.649789_g27954_i0 PRJNA690124 28320 310 1.649789 5.1143459 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 85.5 7e-17   NR VDM04627.1 70667 g27954 i0 54.7 4.53870967741936 64 29 61.9 0 213 22 12 75 VDM04627.1 unnamed protein product [Schistocephalus solidus] diamond 1407 85.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
26892720 26892720 PRJNA690124_P_NODE_10001_length_508_cov_1.754023_g9636_i0 PRJNA690124 10001 508 1.754023 8.91043684 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 63.5 3.55e-8   NR PAA65654.1 282301 g9636 i0 52.9 1.25787401574803 102 42 57.3 3 508 218 19 119 PAA65654.1 hypothetical protein BOX15_Mlig009738g1, partial [Macrostomum lignano] diamond 639 63.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28957267 28957267 PRJNA690124_P_NODE_17188_length_390_cov_5.902208_g16822_i0 PRJNA690124 17188 390 5.902208 23.0186112 Metazoa 33208 Platyhelminthes Platyhelminthes 102 1e-22   NR CAH8822806.1 157069 g16822 i0 40 5.90769230769231 125 71 93.1 3 18 380 241 365 CAH8822806.1 unnamed protein product [Trichobilharzia regenti] diamond 2304 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
29419020 29419020 PRJNA690124_P_NODE_14809_length_419_cov_1.225434_g14444_i0 PRJNA690124 14809 419 1.225434 5.13456846 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 49.3 0.0012   NR BAC66612.1 6161 g14444 i0 58.1 2.44868735083532 43 18 30.8 0 145 17 374 416 BAC66612.1 intermediate filament protein [Dugesia japonica] diamond 1026 49.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
29924509 29924509 PRJNA690124_P_NODE_42531_length_254_cov_1.723757_g42165_i0 PRJNA690124 42531 254 1.723757 4.37834278 Hydatigera taeniaeformis 6205 Platyhelminthes Platyhelminthes 63.9 1.34e-9   NR VDM16822.1 6205 g42165 i0 40.3 0.850393700787402 72 43 85 0 242 27 233 304 VDM16822.1 unnamed protein product [Hydatigera taeniaeformis] diamond 216 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
30030740 30030740 PRJNA690124_P_NODE_54111_length_243_cov_2.364706_g53745_i0 PRJNA690124 54111 243 2.364706 5.74623558 Metazoa 33208 Platyhelminthes Platyhelminthes 128 3.87e-35   NR KAH9284319.1 6210 g53745 i0 82.5 8.88888888888889 80 14 98.8 0 241 2 121 200 KAH9284319.1 40S ribosomal protein S5 [Echinococcus granulosus] diamond 2160 128 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
30208470 30208470 PRJNA690124_P_NODE_36272_length_276_cov_1.448276_g35906_i0 PRJNA690124 36272 276 1.448276 3.99724176 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 82 4.46e-18   NR ADQ26717.1 53468 g35906 i0 62.2 0.891304347826087 82 31 89.1 0 246 1 1 82 ADQ26717.1 tropomyosin 1 high molecular weight isoform, partial [Mesocestoides corti] diamond 246 82 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;