RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA690124", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA690124 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27367102 27367102 PRJNA690124_P_NODE_22743_length_342_cov_1.672862_g22377_i0 PRJNA690124 22743 342 1.672862 5.72118804 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.19e-8   NR KAF4676629.1 330153 g22377 i0 51.9 0.473684210526316 54 25 47.4 1 271 110 24 76 KAF4676629.1 hypothetical protein FOL47_005782 [Perkinsus chesapeaki] diamond 162 62.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
31389602 31389602 PRJNA690124_P_NODE_24116_length_334_cov_1.038314_g23750_i0 PRJNA690124 24116 334 1.038314 3.46796876 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 68.6 9e-11   NR KAF4687968.1 32597 g23750 i0 73.9 10.3023952095808 46 12 41.3 0 88 225 142 187 KAF4687968.1 Protein transport protein Sec61 subunit alpha [Perkinsus olseni] diamond 3441 68.9 0.995645863570392 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;