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contig_metadata

7 rows where bioproject = "PRJNA690124", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA690124 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5773131 5773131 PRJNA690124_P_NODE_46525_length_250_cov_0.881356_g46159_i0 PRJNA690124 46525 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 161 4.3199999999999997e-47   NR OGX28364.1 1801860 g46159 i0 88 1.992 83 10 99.6 0 2 250 22 104 OGX28364.1 MAG: quinolinate synthase [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20] diamond 498 161 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20
9598063 9598063 PRJNA690124_P_NODE_45988_length_251_cov_0.876404_g45622_i0 PRJNA690124 45988 251 0.876404 2.19977404 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 379 9.189999999999998e-101   NTclustered gi|2108353487|gb|CP070655.1| 2035772 g45622 i0 94.332 5.0796812749004 247 14 98 0 1 247 390193 390439 MAG: Candidatus Omnitrophota bacterium isolate bin81 chromosome blastn 1275 379 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27272005 27272005 PRJNA690124_P_NODE_41123_length_259_cov_1.376344_g40757_i0 PRJNA690124 41123 259 1.376344 3.56473096 Omnitrophica bacterium GWA2_41_15 1801814 Bacteria Bacteria 147 1.94e-41   NR OGW71125.1 1801814 g40757 i0 78.6 1.95752895752896 84 18 97.3 0 258 7 228 311 OGW71125.1 MAG: hypothetical protein A2047_01825 [Omnitrophica bacterium GWA2_41_15] diamond 507 147 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium GWA2_41_15
29450488 29450488 PRJNA690124_P_NODE_33950_length_285_cov_1.264151_g33584_i0 PRJNA690124 33950 285 1.264151 3.60283035 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 171 2.91e-47   NR MEK6715005.1 2035772 g33584 i0 88.3 4.94736842105263 94 11 98.9 0 3 284 744 837 MEK6715005.1 pyruvate, phosphate dikinase [Candidatus Omnitrophota bacterium] diamond 1410 171 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32212034 32212034 PRJNA690124_P_NODE_55678_length_242_cov_0.923077_g55312_i0 PRJNA690124 55678 242 0.923077 2.23384634 Bacteria 2 Bacteria Bacteria 58.2 2.88e-9   NR MCK9428687.1 2035772 g55312 i0 77.4 0.805785123966942 31 7 38.4 0 127 219 1 31 MCK9428687.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 195 58.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32548761 32548761 PRJNA690124_P_NODE_43599_length_253_cov_0.866667_g43233_i0 PRJNA690124 43599 253 0.866667 2.19266751 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 52.4 1.65e-5   NR MDP3787361.1 2035772 g43233 i0 33.7 1.05533596837945 89 51 96 2 251 9 65 153 MDP3787361.1 DUF6259 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 267 52.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32611602 32611602 PRJNA690124_P_NODE_55840_length_242_cov_0.923077_g55474_i0 PRJNA690124 55840 242 0.923077 2.23384634 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 115 1.27e-27   NR MBI4353952.1 2035772 g55474 i0 69.6 1.95867768595041 79 24 97.9 0 3 239 241 319 MBI4353952.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 474 115 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;