RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA690124", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA690124 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28630033 28630033 PRJNA690124_P_NODE_54867_length_243_cov_0.917647_g54501_i0 PRJNA690124 54867 243 0.917647 2.22988221 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.5 0.0112   NR MFL3025372.1 2026760 g54501 i0 51.7 0.358024691358025 29 14 35.8 0 4 90 51 79 MFL3025372.1 TlpA disulfide reductase family protein [Fidelibacterota bacterium] diamond 87 43.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31737208 31737208 PRJNA690124_P_NODE_49177_length_248_cov_0.891429_g48811_i0 PRJNA690124 49177 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 100 3.14e-24   NR MCJ7793019.1 2026760 g48811 i0 65.4 4.92338709677419 81 28 98 0 1 243 52 132 MCJ7793019.1 DUF4349 domain-containing protein [Fidelibacterota bacterium] diamond 1221 100 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32169047 32169047 PRJNA690124_P_NODE_48738_length_248_cov_0.891429_g48372_i0 PRJNA690124 48738 248 0.891429 2.21074392 Fidelibacterota bacterium 2026760 Bacteria Bacteria 83.6 1.95e-17   NR MCJ7792725.1 2026760 g48372 i0 70.6 0.616935483870968 51 15 61.7 0 155 3 1 51 MCJ7792725.1 tetratricopeptide repeat protein [Fidelibacterota bacterium] diamond 153 83.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;