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contig_metadata

4 rows where bioproject = "PRJNA690124", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA690124 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3220434 3220434 PRJNA690124_P_NODE_46983_length_250_cov_0.881356_g46617_i0 PRJNA690124 46983 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 165 1.14e-47   NR MCL6640278.1 2053607 g46617 i0 91.6 5.964 83 7 99.6 0 249 1 179 261 MCL6640278.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Candidatus Rokuibacteriota bacterium] diamond 1491 165 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
8322702 8322702 PRJNA690124_P_NODE_47867_length_249_cov_0.886364_g47501_i0 PRJNA690124 47867 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 154 6.58e-44   NR RPH79753.1 2053607 g47501 i0 89 5.91566265060241 82 9 98.8 0 2 247 112 193 RPH79753.1 MAG: adenylosuccinate synthase, partial [Candidatus Rokuibacteriota bacterium] diamond 1473 155 0.993548387096774 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30398818 30398818 PRJNA690124_P_NODE_39013_length_266_cov_1.481865_g38647_i0 PRJNA690124 39013 266 1.481865 3.9417609 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 86.7 2.67e-19   NR MBI3455198.1 2053607 g38647 i0 74.6 1.40977443609023 59 15 66.5 0 177 1 13 71 MBI3455198.1 DUF4864 domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 375 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31473003 31473003 PRJNA690124_P_NODE_55816_length_242_cov_0.923077_g55450_i0 PRJNA690124 55816 242 0.923077 2.23384634 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 151 2.45e-41   NR MBI4269083.1 2053607 g55450 i0 98.8 14.8388429752066 80 1 99.2 0 2 241 125 204 MBI4269083.1 NADH-quinone oxidoreductase subunit M [Candidatus Rokuibacteriota bacterium] diamond 3591 151 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;