contig_metadata
14 rows where bioproject = "PRJNA689790", tax_phylum = "Thermodesulfobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2453424 | 2453424 | PRJNA689790_S_NODE_5462_length_257_cov_1.640909_g5347_i0 | PRJNA689790 | 5462 | 257 | 1.640909 | 4.21713613 | Desulfovibrionaceae bacterium | 2049043 | Bacteria | Bacteria | 122 | 8.929999999999999e-31 | NR | MBQ4133169.1 | 2049043 | g5347 | i0 | 68.2 | 16.7509727626459 | 85 | 27 | 99.2 | 0 | 3 | 257 | 50 | 134 | MBQ4133169.1 F0F1 ATP synthase subunit beta [Desulfovibrionaceae bacterium] | diamond | 4305 | 122 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrionaceae bacterium | |||
| 6282131 | 6282131 | PRJNA689790_S_NODE_4605_length_283_cov_1.247967_g4490_i0 | PRJNA689790 | 4605 | 283 | 1.247967 | 3.53174661 | Lawsonia | 41707 | Bacteria | Bacteria | 490 | 4.67e-134 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g4490 | i0 | 97.88 | 239.339222614841 | 283 | 6 | 100 | 0 | 1 | 283 | 655510 | 655228 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 67733 | 490 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 12148073 | 12148073 | PRJNA689790_S_NODE_6730_length_229_cov_1.984375_g6615_i0 | PRJNA689790 | 6730 | 229 | 1.984375 | 4.54421875 | Desulfuromonadia | 3031651 | Bacteria | Bacteria | 129 | 5.09e-33 | NR | WP_088535434.1 | 1277350 | g6615 | i0 | 73.3 | 2.94759825327511 | 75 | 20 | 98.3 | 0 | 3 | 227 | 495 | 569 | WP_088535434.1 phosphoenolpyruvate carboxykinase (GTP) [Geobacter sp. DSM 9736] | diamond | 675 | 129 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sp. DSM 9736 | ||
| 21071199 | 21071199 | PRJNA689790_S_NODE_8757_length_199_cov_4.919753_g8642_i0 | PRJNA689790 | 8757 | 199 | 4.919753 | 9.79030847 | Desulfobaccales bacterium | 3064668 | Bacteria | Bacteria | 99 | 3e-22 | NR | HEY9072800.1 | 3064668 | g8642 | i0 | 72.7 | 12.9346733668342 | 66 | 15 | 99.5 | 2 | 199 | 2 | 425 | 487 | HEY9072800.1 hydroxylamine reductase [Desulfobaccales bacterium] | diamond | 2574 | 99 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobaccia | Desulfobaccales | Desulfobaccales bacterium | ||||
| 24130032 | 24130032 | PRJNA689790_S_NODE_14059_length_161_cov_1.556452_g13944_i0 | PRJNA689790 | 14059 | 161 | 1.556452 | 2.50588772 | Lawsonia | 41707 | Bacteria | Bacteria | 261 | 2.04e-65 | NTclustered | gi|2318587541|gb|CP107054.1| | 29546 | g13944 | i0 | 97.386 | 254.341614906832 | 153 | 4 | 99 | 0 | 1 | 153 | 653761 | 653913 | Lawsonia intracellularis strain PPE-GX01-2022 chromosome, complete genome | blastn | 40949 | 261 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 28104372 | 28104372 | PRJNA689790_S_NODE_7485_length_216_cov_1.743017_g7370_i0 | PRJNA689790 | 7485 | 216 | 1.743017 | 3.76491672 | root | 1 | Root_unresolved | Root_unresolved | 57.4 | 1.76e-7 | NR | OQY11608.1 | 1971626 | g7370 | i0 | 38 | 1.93055555555556 | 71 | 39 | 98.6 | 1 | 215 | 3 | 542 | 607 | OQY11608.1 MAG: acyl CoA:acetate/3-ketoacid CoA transferase [Desulfobacteraceae bacterium 4572_19] | diamond | 417 | 57.8 | 0.993079584775087 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium 4572_19 | |||
| 28345590 | 28345590 | PRJNA689790_S_NODE_10166_length_186_cov_1.570470_g10051_i0 | PRJNA689790 | 10166 | 186 | 1.57047 | 2.9210742 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 60.5 | 5.02e-9 | NR | MEM7008123.1 | 2202153 | g10051 | i0 | 47.5 | 1.96774193548387 | 61 | 32 | 98.4 | 0 | 2 | 184 | 93 | 153 | MEM7008123.1 SDR family NAD(P)-dependent oxidoreductase [Thermodesulfobacteriota bacterium] | diamond | 366 | 60.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 29009029 | 29009029 | PRJNA689790_S_NODE_10628_length_182_cov_1.613793_g10513_i0 | PRJNA689790 | 10628 | 182 | 1.613793 | 2.93710326 | Lawsonia intracellularis | 29546 | Bacteria | Bacteria | 41.6 | 0.0427 | NR | WP_258524466.1 | 29546 | g10513 | i0 | 35.7 | 0.923076923076923 | 56 | 33 | 87.4 | 1 | 1 | 159 | 514 | 569 | WP_258524466.1 autotransporter outer membrane beta-barrel domain-containing protein [Lawsonia intracellularis] | diamond | 168 | 41.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 29146837 | 29146837 | PRJNA689790_S_NODE_9529_length_192_cov_1.258065_g9414_i0 | PRJNA689790 | 9529 | 192 | 1.258065 | 2.4154848 | Thermodesulfobacteriales | 188710 | Bacteria | Bacteria | 66.6 | 6.94e-11 | NR | WP_068541528.1 | 1795632 | g9414 | i0 | 55.2 | 3.4375 | 58 | 26 | 90.6 | 0 | 3 | 176 | 307 | 364 | WP_068541528.1 hydroxylamine reductase [Thermodesulfatator autotrophicus] | diamond | 660 | 66.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfatatoraceae | Thermodesulfatator | Thermodesulfatator autotrophicus | ||
| 29987613 | 29987613 | PRJNA689790_S_NODE_6951_length_225_cov_1.648936_g6836_i0 | PRJNA689790 | 6951 | 225 | 1.648936 | 3.710106 | Syntrophaceae bacterium | 2052184 | Bacteria | Bacteria | 71.2 | 1.86e-12 | NR | HIC92180.1 | 2052184 | g6836 | i0 | 44.4 | 0.96 | 72 | 40 | 96 | 0 | 2 | 217 | 209 | 280 | HIC92180.1 hypothetical protein [Syntrophaceae bacterium] | diamond | 216 | 71.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Syntrophaceae | Syntrophaceae bacterium | |||
| 30240356 | 30240356 | PRJNA689790_S_NODE_4032_length_305_cov_2.182836_g3917_i0 | PRJNA689790 | 4032 | 305 | 2.182836 | 6.6576498 | Desulfuromonadales bacterium | 2099678 | Bacteria | Bacteria | 137 | 2.39e-35 | NR | RNC66030.1 | 2099678 | g3917 | i0 | 79.2 | 3.81639344262295 | 77 | 15 | 75.7 | 1 | 304 | 74 | 532 | 607 | RNC66030.1 MAG: phosphoenolpyruvate carboxykinase (GTP) [Desulfuromonadales bacterium] | diamond | 1164 | 137 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadales bacterium | ||||
| 30757379 | 30757379 | PRJNA689790_S_NODE_8554_length_202_cov_1.739394_g8439_i0 | PRJNA689790 | 8554 | 202 | 1.739394 | 3.51357588 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 95.9 | 3.77e-21 | NR | MFO7750321.1 | 2049433 | g8439 | i0 | 66.7 | 5.88118811881188 | 66 | 22 | 98 | 0 | 200 | 3 | 358 | 423 | MFO7750321.1 PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein [Desulfobacteraceae bacterium] | diamond | 1188 | 96.7 | 0.991726990692865 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteraceae | Desulfobacteraceae bacterium | |||
| 31199230 | 31199230 | PRJNA689790_S_NODE_13655_length_163_cov_1.238095_g13540_i0 | PRJNA689790 | 13655 | 163 | 1.238095 | 2.01809485 | Desulfovibrionaceae | 194924 | Bacteria | Bacteria | 94.4 | 4.3e-23 | NR | WP_011526943.1 | 29546 | g13540 | i0 | 86.8 | 1.95092024539877 | 53 | 7 | 97.5 | 0 | 3 | 161 | 17 | 69 | WP_011526943.1 flagellar basal body rod protein FlgB [Lawsonia intracellularis] | diamond | 318 | 94.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Lawsonia | Lawsonia intracellularis | ||
| 32737669 | 32737669 | PRJNA689790_S_NODE_15160_length_156_cov_1.966387_g15045_i0 | PRJNA689790 | 15160 | 156 | 1.966387 | 3.06756372 | Desulfosalsimonas propionicica | 332175 | Bacteria | Bacteria | 58.5 | 2.95e-8 | NR | WP_181551675.1 | 332175 | g15045 | i0 | 54.3 | 2.57692307692308 | 46 | 21 | 88.5 | 0 | 2 | 139 | 119 | 164 | WP_181551675.1 hydroxylamine reductase [Desulfosalsimonas propionicica] | diamond | 402 | 58.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosalsimonadaceae | Desulfosalsimonas | Desulfosalsimonas propionicica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;