RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA689790", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nanobdellota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29955962 29955962 PRJNA689790_S_NODE_10831_length_180_cov_2.993007_g10716_i0 PRJNA689790 10831 180 2.993007 5.3874126 Nanobdellota archaeon 2026764 Archaea Archaea 58.5 7.07e-9   NR MDA3836408.1 2026764 g10716 i0 48.1 0.9 54 24 85 2 24 176 72 124 MDA3836408.1 hypothetical protein [Nanoarchaeota archaeon] diamond 162 58.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32548750 32548750 PRJNA689790_S_NODE_9439_length_193_cov_1.000000_g9324_i0 PRJNA689790 9439 193 1 1.93 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 88.6 1.19e-18   NR MDP6845833.1 2910166 g9324 i0 57.8 0.994818652849741 64 27 99.5 0 192 1 399 462 MDP6845833.1 IMP dehydrogenase [Candidatus Nanoarchaeia archaeon] diamond 192 88.6 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;