RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA689790" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA689790 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3219606 3219606 PRJNA689790_S_NODE_3923_length_310_cov_3.567766_g3808_i0 PRJNA689790 3923 310 3.567766 11.0600746 Zhejiang betaflexivirus 2 2824414 Viruses Viruses 532 8.48e-147   NTclustered gi|2075444446|gb|MW897315.1| 2824414 g3808 i0 98.99 85.658064516129 297 3 96 0 14 310 8181 7885 MAG: Zhejiang betaflexivirus 2 isolate 15-k141_99752, complete genome blastn 26554 532 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Zhejiang betaflexivirus 2
10872787 10872787 PRJNA689790_S_NODE_2629_length_392_cov_2.549296_g2514_i0 PRJNA689790 2629 392 2.549296 9.99324032 Zhejiang betaflexivirus 2 2824414 Viruses Viruses 691 0   NTclustered gi|2075444446|gb|MW897315.1| 2824414 g2514 i0 98.469 28.4821428571429 392 6 100 0 1 392 7909 7518 MAG: Zhejiang betaflexivirus 2 isolate 15-k141_99752, complete genome blastn 11165 691 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Zhejiang betaflexivirus 2
13422605 13422605 PRJNA689790_S_NODE_13971_length_161_cov_2.830645_g13856_i0 PRJNA689790 13971 161 2.830645 4.55733845 Carlavirus vignae 3427805 Viruses Viruses 276 7.29e-70   NTclustered gi|406353201|gb|JX310549.1| 67761 g13856 i0 97.516 1.98757763975155 161 4 100 0 1 161 764 604 Cowpea mild mottle virus isolate Venezuela coat protein gene, partial cds; and nucleic acid binding protein gene, complete cds blastn 320 276 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae
17246593 17246593 PRJNA689790_S_NODE_10774_length_181_cov_1.354167_g10659_i0 PRJNA689790 10774 181 1.354167 2.45104227 Carlavirus vignae 3427805 Viruses Viruses 204 4.01e-48   NTclustered gi|406353201|gb|JX310549.1| 67761 g10659 i0 94.656 0.723756906077348 131 7 72 0 1 131 131 1 Cowpea mild mottle virus isolate Venezuela coat protein gene, partial cds; and nucleic acid binding protein gene, complete cds blastn 131 204 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus vignae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;