contig_metadata
8 rows where bioproject = "PRJNA689790" and tax_phylum = "Cyanobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9597310 | 9597310 | PRJNA689790_S_NODE_7428_length_217_cov_1.505556_g7313_i0 | PRJNA689790 | 7428 | 217 | 1.505556 | 3.26705652 | Cyanobacteriota bacterium | 2847862 | Bacteria | Bacteria | 85.9 | 2.29e-18 | NR | MBX9694784.1 | 2847862 | g7313 | i0 | 53.5 | 0.981566820276498 | 71 | 31 | 95.4 | 1 | 217 | 11 | 127 | 197 | MBX9694784.1 protein kinase [Cyanobacteriota bacterium] | diamond | 213 | 85.9 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanobacteriota bacterium | |||||
| 17755999 | 17755999 | PRJNA689790_S_NODE_16894_length_150_cov_1.336283_g16779_i0 | PRJNA689790 | 16894 | 150 | 1.336283 | 2.0044245 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 215 | 1.47e-51 | NTclustered | gi|427998918|gb|CP003607.1| | 56110 | g16779 | i0 | 93.151 | 193.26 | 146 | 10 | 97 | 0 | 1 | 146 | 2199630 | 2199775 | Oscillatoria acuminata PCC 6304, complete genome | blastn | 28989 | 217 | 0.990783410138249 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Oscillatoria | Oscillatoria acuminata | |
| 24130038 | 24130038 | PRJNA689790_S_NODE_16759_length_150_cov_2.398230_g16644_i0 | PRJNA689790 | 16759 | 150 | 2.39823 | 3.597345 | Microcystis | 1125 | Bacteria | Bacteria | 248 | 1.45e-61 | NTclustered | gi|1861038541|dbj|LC557454.1| | 1126 | g16644 | i0 | 96.667 | 179.56 | 150 | 4 | 100 | 1 | 1 | 150 | 390 | 538 | Microcystis aeruginosa NIES-1062 gene for 23S rRNA, partial sequence | blastn | 26934 | 250 | 0.992 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Microcystaceae | Microcystis | Microcystis aeruginosa | |
| 27125065 | 27125065 | PRJNA689790_S_NODE_4502_length_286_cov_1.975904_g4387_i0 | PRJNA689790 | 4502 | 286 | 1.975904 | 5.65108544 | root | 1 | Root_unresolved | Root_unresolved | 103 | 2.67e-23 | NR | WP_015149409.1 | 118323 | g4387 | i0 | 56.2 | 5.4965034965035 | 89 | 39 | 93.4 | 0 | 10 | 276 | 785 | 873 | WP_015149409.1 colicin transporter [Oscillatoria acuminata] | diamond | 1572 | 104 | 0.990384615384615 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Oscillatoria | Oscillatoria acuminata | |
| 28262224 | 28262224 | PRJNA689790_S_NODE_10906_length_180_cov_1.363636_g10791_i0 | PRJNA689790 | 10906 | 180 | 1.363636 | 2.4545448 | Nostoc | 1177 | Bacteria | Bacteria | 56.6 | 2e-7 | NR | WP_409881199.1 | 3075388 | g10791 | i0 | 54.7 | 1.76666666666667 | 53 | 24 | 88.3 | 0 | 163 | 5 | 457 | 509 | WP_409881199.1 DUF4347 domain-containing protein, partial [Nostoc sp. DedQUE02] | diamond | 318 | 56.6 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. DedQUE02 | |
| 30177030 | 30177030 | PRJNA689790_S_NODE_3512_length_332_cov_1.661017_g3397_i0 | PRJNA689790 | 3512 | 332 | 1.661017 | 5.51457644 | Synechococcus sp. GFB | 1131 | Bacteria | Bacteria | 89.4 | 4.73e-20 | NR | WP_048016504.1 | 1662190 | g3397 | i0 | 49.5 | 3.11746987951807 | 95 | 44 | 85.8 | 2 | 327 | 43 | 54 | 144 | WP_048016504.1 Hsp20/alpha crystallin family protein [Synechococcus sp. GFB01] | diamond | 1035 | 89.4 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. GFB01 | |
| 30524647 | 30524647 | PRJNA689790_S_NODE_3173_length_352_cov_2.342857_g3058_i0 | PRJNA689790 | 3173 | 352 | 2.342857 | 8.24685664 | Dolichospermum sp. | 2720786 | Bacteria | Bacteria | 60.1 | 1.03e-7 | NR | MBJ7298695.1 | 2720786 | g3058 | i0 | 24.6 | 0.971590909090909 | 114 | 85 | 96.3 | 1 | 344 | 6 | 95 | 208 | MBJ7298695.1 hypothetical protein [Dolichospermum sp.] | diamond | 342 | 60.1 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Dolichospermum | Dolichospermum sp. | |
| 31832042 | 31832042 | PRJNA689790_S_NODE_12677_length_168_cov_1.778626_g12562_i0 | PRJNA689790 | 12677 | 168 | 1.778626 | 2.98809168 | Sphaerospermopsis | 752201 | Bacteria | Bacteria | 41.6 | 0.0349 | NR | MFM5988005.1 | 289435 | g12562 | i0 | 41.8 | 1.55357142857143 | 55 | 31 | 98.2 | 1 | 2 | 166 | 859 | 912 | MFM5988005.1 reverse transcriptase domain-containing protein [Sphaerospermopsis kisseleviana] | diamond | 261 | 41.6 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Sphaerospermopsis | Sphaerospermopsis kisseleviana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;