RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA689790", tax_phylum = "Candidatus Muiribacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 1 ✖

tax_phylum 1

  • Candidatus Muiribacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27113761 27113761 PRJNA689790_S_NODE_9822_length_189_cov_1.282895_g9707_i0 PRJNA689790 9822 189 1.282895 2.42467155 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 78.2 1.9e-15   NR MCK9476910.1 2053465 g9707 i0 58.1 3.93650793650794 62 25 98.4 1 188 3 69 129 MCK9476910.1 3-deoxy-8-phosphooctulonate synthase [Candidatus Muiribacterium halophilum] diamond 744 78.2 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;