RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA689790", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28156381 28156381 PRJNA689790_S_NODE_11325_length_177_cov_1.100000_g11210_i0 PRJNA689790 11325 177 1.1 1.947 Aminobacterium 81466 Bacteria Bacteria 41.6 0.0379   NR WP_286934164.1 81466 g11210 i0 42.6 1.55932203389831 47 27 79.7 0 146 6 12 58 WP_286934164.1 MULTISPECIES: formate/nitrite transporter family protein [Aminobacterium] diamond 276 41.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminobacterium  
29797934 29797934 PRJNA689790_S_NODE_8791_length_199_cov_1.925926_g8676_i0 PRJNA689790 8791 199 1.925926 3.83259274 Synergistales bacterium 2268201 Bacteria Bacteria 66.2 8.19e-11   NR MDD4364172.1 2268201 g8676 i0 51.5 1.98994974874372 66 32 99.5 0 2 199 58 123 MDD4364172.1 carbamate kinase [Synergistales bacterium] diamond 396 66.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;