RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA689790", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27240283 27240283 PRJNA689790_S_NODE_1263_length_591_cov_4.765343_g1167_i0 PRJNA689790 1263 591 4.765343 28.16317713 Rozella allomycis CSF55 988480 Fungi Fungi 185 4.26e-56   NR EPZ32213.1 988480 g1167 i0 48.9 7.83248730964467 182 88 92.4 1 7 552 2 178 EPZ32213.1 60S ribosomal protein L20-B [Rozella allomycis CSF55] diamond 4629 185 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28029971 28029971 PRJNA689790_S_NODE_3885_length_312_cov_2.818182_g3770_i0 PRJNA689790 3885 312 2.818182 8.79272784 Rozella allomycis CSF55 988480 Fungi Fungi 90.1 1.69e-20   NR RKP16348.1 988480 g3770 i0 51.7 4.14423076923077 89 43 85.6 0 3 269 53 141 RKP16348.1 HSP20-like chaperone [Rozella allomycis CSF55] diamond 1293 90.1 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28535275 28535275 PRJNA689790_S_NODE_3907_length_311_cov_2.686131_g3792_i0 PRJNA689790 3907 311 2.686131 8.35386741 Rozella allomycis CSF55 988480 Fungi Fungi 47.4 0.00158   NR EPZ33718.1 988480 g3792 i0 37.5 0.694533762057878 72 39 64.6 2 7 207 166 236 EPZ33718.1 hypothetical protein O9G_005729 [Rozella allomycis CSF55] diamond 216 47.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;