RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA689790", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA689790 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
668710 668710 PRJNA689790_S_NODE_14081_length_161_cov_1.258065_g13966_i0 PRJNA689790 14081 161 1.258065 2.02548465 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.2 1.32e-20   NR ETO12436.1 46433 g13966 i0 84.9 41.4782608695652 53 8 98.8 0 160 2 181 233 ETO12436.1 hypothetical protein RFI_24941 [Reticulomyxa filosa] diamond 6678 93.6 0.995726495726496 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
26639133 26639133 PRJNA689790_S_NODE_11841_length_173_cov_1.772059_g11726_i0 PRJNA689790 11841 173 1.772059 3.06566207 Foraminifera sp. chocolate silver saccamminid 1415197 SAR_Eukaryotes SAR_Eukaryotes 81.3 7.41e-17   NR AJD73542.1 1415197 g11726 i0 65.5 0.953757225433526 55 19 95.4 0 8 172 170 224 AJD73542.1 actin, partial [Foraminifera sp. chocolate silver saccamminid] diamond 165 81.3 1 Eukaryota Sar   Foraminifera         Foraminifera sp. chocolate silver saccamminid
27587939 27587939 PRJNA689790_S_NODE_13524_length_163_cov_4.063492_g13409_i0 PRJNA689790 13524 163 4.063492 6.62349196 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 45.8 3.16e-4   NR ETO00492.1 46433 g13409 i0 46.2 0.957055214723926 52 23 95.7 2 158 3 4 50 ETO00492.1 actin, partial [Reticulomyxa filosa] diamond 156 45.8 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29924490 29924490 PRJNA689790_S_NODE_8911_length_198_cov_1.689441_g8796_i0 PRJNA689790 8911 198 1.689441 3.34509318 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 89 7.15e-19   NR ETO21992.1 46433 g8796 i0 63.1 0.984848484848485 65 21 98.5 1 197 3 309 370 ETO21992.1 hypothetical protein RFI_15211 [Reticulomyxa filosa] diamond 195 89 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;