RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA689790", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 7 ✖

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA689790 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7047300 7047300 PRJNA689790_S_NODE_11526_length_175_cov_1.978261_g11411_i0 PRJNA689790 11526 175 1.978261 3.46195675 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.001   NTclustered gi|2794943219|ref|XM_067872182.1| 2049356 g11411 i0 96.97 1.49142857142857 33 1 19 0 62 94 945 977 Monocercomonoides exilis uncharacterized protein (MONOS_2270fu2271), partial mRNA blastn 261 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8831076 8831076 PRJNA689790_S_NODE_12127_length_171_cov_2.037313_g12012_i0 PRJNA689790 12127 171 2.037313 3.48380523 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 95.9 2.3099999999999999e-23   NR KAK3118036.1 342808 g12012 i0 86 5 57 8 100 0 1 171 81 137 KAK3118036.1 small subunit ribosomal protein S14e [Paratrimastix pyriformis] diamond 855 95.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
14697662 14697662 PRJNA689790_S_NODE_14712_length_158_cov_1.603306_g14597_i0 PRJNA689790 14712 158 1.603306 2.53322348 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.004   NTclustered gi|2794972389|ref|XM_067867407.1| 2049356 g14597 i0 92.105 1.48101265822785 38 3 24 0 23 60 3986 3949 Monocercomonoides exilis uncharacterized protein (MONOS_14592), partial mRNA blastn 234 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
27019078 27019078 PRJNA689790_S_NODE_3762_length_318_cov_2.903915_g3647_i0 PRJNA689790 3762 318 2.903915 9.2344497 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 53.1 3.91e-6   NR XP_067729536.1 2049356 g3647 i0 40.8 0.924528301886792 49 29 46.2 0 267 121 4 52 XP_067729536.1 putative ribosomal protein L28 [Monocercomonoides exilis] diamond 294 53.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
28503514 28503514 PRJNA689790_S_NODE_12507_length_169_cov_1.719697_g12392_i0 PRJNA689790 12507 169 1.719697 2.90628793 Streblomastix strix 222440 Preaxostyla other_Eukaryota 60.1 1.05e-8   NR KAA6375072.1 222440 g12392 i0 53.1 0.869822485207101 49 22 85.2 1 8 151 318 366 KAA6375072.1 MAG: putative ATP-dependent RNA helicase dbp2 [Streblomastix strix] diamond 147 60.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
28598350 28598350 PRJNA689790_S_NODE_10407_length_184_cov_1.414966_g10292_i0 PRJNA689790 10407 184 1.414966 2.60353744 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 45.1 0.00264   NR XP_067733360.1 2049356 g10292 i0 41.4 0.945652173913043 58 34 94.6 0 5 178 216 273 XP_067733360.1 putative NLR family CARD domain-containing protein 3 [Monocercomonoides exilis] diamond 174 45.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31852267 31852267 PRJNA689790_S_NODE_12177_length_171_cov_1.455224_g12062_i0 PRJNA689790 12177 171 1.455224 2.48843304 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 88.6 1.5700000000000001e-19   NR KAK2957659.1 2049346 g12062 i0 73.2 0.982456140350877 56 15 98.2 0 168 1 208 263 KAK2957659.1 putative D-aminoacyl-tRNA deacylase [Blattamonas nauphoetae] diamond 168 88.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;