RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA689790", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA689790 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3219561 3219561 PRJNA689790_S_NODE_12323_length_170_cov_1.759398_g12208_i0 PRJNA689790 12323 170 1.759398 2.9909766 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 126 8.26e-25   NTclustered gi|2794868929|ref|XM_067917821.1| 135588 g12208 i0 84.8 5.57058823529412 125 19 74 0 4 128 275 151 Histomonas meleagridis Histone H2A (GO595_004665), partial mRNA blastn 947 126 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
21071130 21071130 PRJNA689790_S_NODE_12337_length_170_cov_1.729323_g12222_i0 PRJNA689790 12337 170 1.729323 2.9398491 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.004   NTclustered gi|2319623067|ref|XM_001299860.2| 412133 g12222 i0 96.875 0.188235294117647 32 1 19 0 17 48 239 270 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0127180), partial mRNA blastn 32 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28945786 28945786 PRJNA689790_S_NODE_12568_length_169_cov_1.174242_g12453_i0 PRJNA689790 12568 169 1.174242 1.98446898 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 42.4 0.0195   NR XP_001327865.1 412133 g12453 i0 71.4 0.372781065088757 21 6 37.3 0 169 107 2077 2097 XP_001327865.1 ataxia telangiectasia mutated (ATM) -related family [Trichomonas vaginalis G3] diamond 63 42.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29040476 29040476 PRJNA689790_S_NODE_7608_length_214_cov_1.740113_g7493_i0 PRJNA689790 7608 214 1.740113 3.72384182 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 65.1 1.04e-10   NR XP_067772754.1 135588 g7493 i0 61.9 0.588785046728972 42 16 58.9 0 136 11 154 195 XP_067772754.1 Pre-mRNA-splicing factor CWC24 [Histomonas meleagridis] diamond 126 65.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;