RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA689790", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31062092 31062092 PRJNA689790_S_NODE_9995_length_187_cov_2.526667_g9880_i0 PRJNA689790 9995 187 2.526667 4.72486729 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 49.3 6.62e-5   NR MCF8435305.1 2049428 g9880 i0 42.4 0.946524064171123 59 34 94.7 0 187 11 88 146 MCF8435305.1 ATP-binding cassette domain-containing protein [Ignavibacteriales bacterium] diamond 177 49.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32200481 32200481 PRJNA689790_S_NODE_1478_length_544_cov_2.994083_g1377_i0 PRJNA689790 1478 544 2.994083 16.28781152 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 68.6 8.06e-10   NR MCB0748645.1 2026749 g1377 i0 31.7 0.992647058823529 180 108 98.7 8 542 6 316 481 MCB0748645.1 hypothetical protein [Ignavibacteriota bacterium] diamond 540 68.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;