RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA689790", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA689790 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32148714 32148714 PRJNA689790_S_NODE_4978_length_271_cov_2.000000_g4863_i0 PRJNA689790 4978 271 2 5.42 Pseudomonadati 3379134 Bacteria Bacteria 92 2.47e-19   NR MFL2997958.1 2026760 g4863 i0 68.9 5.59040590405904 61 18 67.5 1 270 88 878 937 MFL2997958.1 aminomethyl-transferring glycine dehydrogenase [Fidelibacterota bacterium] diamond 1515 92.4 0.995670995670996 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32212027 32212027 PRJNA689790_S_NODE_3258_length_346_cov_2.754045_g3143_i0 PRJNA689790 3258 346 2.754045 9.5289957 FCB group 1783270 Bacteria Bacteria 92.8 3.1e-19   NR MAX30620.1 2026760 g3143 i0 44.3 3.43352601156069 97 53 84.1 1 56 346 163 258 MAX30620.1 FAD-dependent oxidoreductase [Fidelibacterota bacterium] diamond 1188 92.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;