contig_metadata
11 rows where bioproject = "PRJNA688931" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26607327 | 26607327 | PRJNA688931_P_NODE_43921_length_162_cov_0.902655_g43708_i0 | PRJNA688931 | 43921 | 162 | 0.902655 | 1.4623011 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 93.6 | 6.110000000000001e-21 | NR | MBY0491440.1 | 2026741 | g43708 | i0 | 97.8 | 2.55555555555556 | 46 | 1 | 85.2 | 0 | 23 | 160 | 1 | 46 | MBY0491440.1 transaldolase [Gemmatimonadaceae bacterium] | diamond | 414 | 93.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28104359 | 28104359 | PRJNA688931_P_NODE_41885_length_163_cov_0.912281_g41672_i0 | PRJNA688931 | 41885 | 163 | 0.912281 | 1.48701803 | Bacteria | 2 | Bacteria | Bacteria | 42.7 | 0.0123 | NR | HET7585569.1 | 2026741 | g41672 | i0 | 40 | 3 | 55 | 31 | 97.5 | 1 | 161 | 3 | 69 | 123 | HET7585569.1 NAD(P)/FAD-dependent oxidoreductase [Gemmatimonadaceae bacterium] | diamond | 489 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28672938 | 28672938 | PRJNA688931_P_NODE_25527_length_202_cov_1.437908_g25314_i0 | PRJNA688931 | 25527 | 202 | 1.437908 | 2.90457416 | Bacteria | 2 | Bacteria | Bacteria | 70.9 | 2.35e-12 | NR | HTK49688.1 | 2026741 | g25314 | i0 | 55.4 | 17.5990099009901 | 56 | 25 | 83.2 | 0 | 196 | 29 | 20 | 75 | HTK49688.1 J domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 3555 | 71.2 | 0.995786516853933 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28945773 | 28945773 | PRJNA688931_P_NODE_44768_length_152_cov_2.009709_g44555_i0 | PRJNA688931 | 44768 | 152 | 2.009709 | 3.05475768 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 78.2 | 1.3e-16 | NR | HET7423079.1 | 2448054 | g44555 | i0 | 78.7 | 0.927631578947368 | 47 | 10 | 92.8 | 0 | 152 | 12 | 108 | 154 | HET7423079.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Gemmatimonadales bacterium] | diamond | 141 | 78.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30587671 | 30587671 | PRJNA688931_P_NODE_19953_length_229_cov_1.483333_g19740_i0 | PRJNA688931 | 19953 | 229 | 1.483333 | 3.39683257 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 99.8 | 2.49e-24 | NR | MDH3455568.1 | 2026742 | g19740 | i0 | 65.8 | 3.9825327510917 | 76 | 26 | 99.6 | 0 | 228 | 1 | 72 | 147 | MDH3455568.1 hypoxanthine phosphoribosyltransferase [Gemmatimonadota bacterium] | diamond | 912 | 99.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30682399 | 30682399 | PRJNA688931_P_NODE_25593_length_202_cov_1.215686_g25380_i0 | PRJNA688931 | 25593 | 202 | 1.215686 | 2.45568572 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 51.2 | 2.17e-5 | NR | MCY4544981.1 | 2026742 | g25380 | i0 | 40.7 | 1.76732673267327 | 59 | 35 | 87.6 | 0 | 177 | 1 | 81 | 139 | MCY4544981.1 histidinol-phosphate transaminase [Gemmatimonadota bacterium] | diamond | 357 | 51.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30840623 | 30840623 | PRJNA688931_P_NODE_21674_length_220_cov_1.081871_g21461_i0 | PRJNA688931 | 21674 | 220 | 1.081871 | 2.3801162 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 43.1 | 0.0192 | NR | HKP75895.1 | 3047548 | g21461 | i0 | 41.1 | 1.93636363636364 | 73 | 37 | 94.1 | 2 | 209 | 3 | 3 | 73 | HKP75895.1 S8 family peptidase [Longimicrobiaceae bacterium] | diamond | 426 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 31883899 | 31883899 | PRJNA688931_P_NODE_36497_length_168_cov_0.865546_g36284_i0 | PRJNA688931 | 36497 | 168 | 0.865546 | 1.45411728 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 80.9 | 4.22e-16 | NR | MBP7549800.1 | 2026741 | g36284 | i0 | 69.1 | 4.91071428571429 | 55 | 17 | 98.2 | 0 | 166 | 2 | 78 | 132 | MBP7549800.1 M20/M25/M40 family metallo-hydrolase [Gemmatimonadaceae bacterium] | diamond | 825 | 80.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32042210 | 32042210 | PRJNA688931_P_NODE_38538_length_166_cov_0.880342_g38325_i0 | PRJNA688931 | 38538 | 166 | 0.880342 | 1.46136772 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 97.1 | 7.290000000000001e-22 | NR | HEX5575431.1 | 2448054 | g38325 | i0 | 81.8 | 15.9036144578313 | 55 | 10 | 99.4 | 0 | 1 | 165 | 71 | 125 | HEX5575431.1 Glu/Leu/Phe/Val dehydrogenase [Gemmatimonadales bacterium] | diamond | 2640 | 97.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 32263979 | 32263979 | PRJNA688931_P_NODE_6558_length_427_cov_1.777778_g6345_i0 | PRJNA688931 | 6558 | 427 | 1.777778 | 7.59111206 | uncultured Gemmatimonadota bacterium | 203437 | Bacteria | Bacteria | 92.8 | 1.14e-19 | NR | CAA9369372.1 | 203437 | g6345 | i0 | 47.7 | 4.84074941451991 | 107 | 51 | 75.2 | 2 | 104 | 424 | 33 | 134 | CAA9369372.1 MAG: hypothetical protein AVDCRST_MAG68-5340 [uncultured Gemmatimonadota bacterium] | diamond | 2067 | 92.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | uncultured Gemmatimonadota bacterium | |||||
| 32768803 | 32768803 | PRJNA688931_P_NODE_12500_length_294_cov_3.400000_g12287_i0 | PRJNA688931 | 12500 | 294 | 3.4 | 9.996 | Gemmatimonas sp. | 1962908 | Bacteria | Bacteria | 121 | 5.800000000000001e-30 | NR | WP_373064520.1 | 1962908 | g12287 | i0 | 67.7 | 1.01020408163265 | 99 | 31 | 100 | 1 | 294 | 1 | 281 | 379 | WP_373064520.1 S8 family serine peptidase [Gemmatimonas sp.] | diamond | 297 | 121 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;